| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0466 |
|---|
| Symbol | |
|---|
| ID | 8806206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 484442 |
|---|
| End bp | 485407 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Lysine--tRNA ligase |
|---|
| Protein accession | YP_003459717 |
|---|
| Protein GI | 289207651 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.828924 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACT GGCGACCGGG CGCCGCGGCG GCCCGGGAGG CCCGTGCACG GCTGCTGACT
GGCCTGCGTG GCTTCTTTGC CGCCCGCAAT GTGCTCGAAG TAGAAACCCC GATCCTGAGC
CACGGGGCGC CGCTGGATCC TATGGTCGAG AGCTGGACCG CGACGAGCCC GGACGGCGCC
AGCGGCTATC TGCAGACCTC GCCGGAATAC CCGATGAAGC GCCTGCTGGC GGATGGTGCG
CCGGACATCT ACCAGATCGC GCGCGTCTTT CGGGGTGGCG AAGCGGGGCC CCGTCACAAC
CCCGAATTCA CGCTGCTGGA GTGGTACCGC CACGGGATGG ATCATCATCG TCTGGCGCGC
GAGGTGGTGG CCCTGATCAT GAACCAGGCG GCACTGGATG CGAGCTGGAG GCGTCCGGCC
CGCCTGCGCG AGATCTCGTA TCAGGCGTTG TTTCAGGCAC ATCTGGGTAT CGACCCGCTG
GTGGCGGATG CCGACGAACT GCAGGCCGTC GCGGCACGGC AGGGGCTGGA CATCCAGGGG
GCACTGGATC GAGATGCCTG GCTGGATCTC CTGATCAGCC TGGCGATTGC CCCGGCGTTT
CCGGACGACC GGCTCACCGT GGTGCATGAC TATCCGGAGA GCCAGGCGGT GCTGGCGCGC
CCCTGTGAAC AGGATGCCCG GCTCGCGGCG CGCTTCGAGG TGTACTGGGG CGCACTGGAG
CTGGCCAATG GCTACCACGA GCTGAGCGAC CTCGCCCAGT TTCGCGAACG TCGCGATCGC
GACCAGGCGC TGCGCAGGCA GCGCGGCCAG GTCCTGCCCC GGCCCGATGC CCATCTGGAC
GCCGCGCTGG CGTCGGGGCT GCCCGAGTGC GCCGGAGTGG CACTGGGGGT CGATCGTCTG
CTGATGCGGC TGTTGGGGGT GGAGCGTATC GAGCAGGTAA TCGACTTCCC GTTCGAGTCC
GCCTGA
|
|---|
| Protein sequence | MTDWRPGAAA AREARARLLT GLRGFFAARN VLEVETPILS HGAPLDPMVE SWTATSPDGA
SGYLQTSPEY PMKRLLADGA PDIYQIARVF RGGEAGPRHN PEFTLLEWYR HGMDHHRLAR
EVVALIMNQA ALDASWRRPA RLREISYQAL FQAHLGIDPL VADADELQAV AARQGLDIQG
ALDRDAWLDL LISLAIAPAF PDDRLTVVHD YPESQAVLAR PCEQDARLAA RFEVYWGALE
LANGYHELSD LAQFRERRDR DQALRRQRGQ VLPRPDAHLD AALASGLPEC AGVALGVDRL
LMRLLGVERI EQVIDFPFES A
|
|---|
| |