| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2745 |
|---|
| Symbol | |
|---|
| ID | 2740964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 2799971 |
|---|
| End bp | 2800786 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637161642 |
|---|
| Product | fic family protein |
|---|
| Protein accession | NP_973343 |
|---|
| Protein GI | 42528245 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3177] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.413938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAATC GGAACGAAGA ACAAAACTTT AATAAACTTT CAGAAGTTAT AAACGAATAC
AACAAGCTGC AAATTTCTCA GCAGATTGAT TATGATAAAT TCTATTTATA TTCGATTATC
ACACATTCAA CGGCAATAGA AGGTTCTACC ATAACGGAAA TTGAAAATCA GTTACTTTTT
GACGAAGGGA TAAGTGCGAA TAAGCCGATT CATGAACAGC TTATGAACCT TGACCTAAAA
GCTGCATACG AAAAGAGTTT TGAACTTGCA AAACAGCATA CGCAAATCAC ACCGGAAATC
CTTTGTGAAC TTTCAGTTCT CGTAATGAAA AACACCGGCA CTGTATACAA TACAATCGGC
GGAACATTTT CTTCTGCAAA AGGAGAGCTC AGATTGGTAA ATGTCAGTGC GGGGCGAGGC
GGAAAAAGCT ATATGGCATG GCAGAAGCTT CCGCAAAAAC TGGAAGAATT TTGCAGTTGG
CTCAATTCGG AAAGAAAAAG CATTGCAGAA AAAGATATAG AAGCTCAATA CGCTTTTAGC
TTTCTCGCTC ATTATAAACT TGTTCACATT CATCCGTGGG CGGATGGAAA CGGACGGATG
AGCCGGCTCT TAATGAATGT TATCCAATAT GAAGCGGGTC TAGTTCCTGC AATAATCAAA
AAAGAAAACA GAGCGGAATA TATTCAAAGT CTCGCTTCTT CACAAGACAA GGATGATCCT
GCGGAGTTCT TACATTTTAT GTTTTCGCAC CATATACGGA ATTTGAGCGA GCAGATAGAA
GAATATAAAA ACTCGCTTGA AATGAGCGGC AGCTGA
|
|---|
| Protein sequence | MINRNEEQNF NKLSEVINEY NKLQISQQID YDKFYLYSII THSTAIEGST ITEIENQLLF
DEGISANKPI HEQLMNLDLK AAYEKSFELA KQHTQITPEI LCELSVLVMK NTGTVYNTIG
GTFSSAKGEL RLVNVSAGRG GKSYMAWQKL PQKLEEFCSW LNSERKSIAE KDIEAQYAFS
FLAHYKLVHI HPWADGNGRM SRLLMNVIQY EAGLVPAIIK KENRAEYIQS LASSQDKDDP
AEFLHFMFSH HIRNLSEQIE EYKNSLEMSG S
|
|---|
| |