| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2672 |
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| Symbol | |
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| ID | 2741117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2710350 |
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| End bp | 2711690 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637161569 |
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| Product | TPR domain-containing protein |
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| Protein accession | NP_973270 |
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| Protein GI | 42528172 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.306988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATCGA CTATTATTAT TTCCTTTTTT ATTATTATTA TTGCTGTTGT TATCCTTGTA
CTTGTAGCTA CACGAAGCAA ATCACCCTCT TCGGGAGGAA GAAAGAAAGT TAAAGGCAGA
GCCGTTTTAA TGAAAGAAGC CTCACGCCGC TTAGCTCAAA ACCCTCATGA TATTGAAGGT
TTATTTATAA TGGGAGATAT TTATTATCAA GACCAAGACT GGGAAAAGGC GTATACGGCA
TATTCGGCCT TACTGGATAG AATGAAGCCG CTCGAAATGA ATAAGCAGCT GGATGTCGCT
ATCAGGTACG GTATCTGTGC CCTAAAAACA AACAGGCTCC CCGAGGCAAA AAAAGGCTTT
CTTCTTGCAG AAACAATCAA TCCTAAAAAT CTTGATGTAA GCTATAACTT AGGCTATATC
TATTACCTCG AAAAAGACTA TGAAAAAGCC GTTAAGTTTT TCAAAAGAAC CTTGATACTT
GAACCAAACA GCTTTTTGGC AACAAAGTAT CTTGGATATA CTTTACAGCA TTTGCATAAA
TACACCGAAG CCCTCCCGGC TCTAAAAAAA GCCCTGGATT TTAAACCCGA TGATAAGGAA
GTTTTGTTTG CAATGGGCGA ATGTTTTTAT GAAACGGAAG CGACCGACCG ATGCTTAAAA
ATATTAAACC ATCTCAGAGT AGATCCCGTT TTCGGACCTC AAGCTTCATT ATACACAGGT
ATGATAAGAG CGAAGGCCGA TCAGTTGGAA AGAGCTATCG AAGACTTCCA AATAGGTTTA
AAGCATACGG GAATACCGAT GGATATTTCT AACGAGCTAA AATACAGATT AGCTCAAGCC
TATATAAAGA CTCAAGAAAT AGGTCAAGCC CTTCATCTTT TAAAAGAAAT ACAATCCATA
AGCCCCGGAT ACAAGGATGC TGCAACCTTA ATAATGAGAT ATCAGGAATT AAATAAAAAC
AAGAACTTAC AGATATACCT AATGTCGGGA CAAAGCGAAT TCGTAGCTCT GTGCCGCAAA
ATTGTCGCCC GTTTCTATCC GAAAGCTAAG GTAAAAATAG TGGATATTTC CGTATTGGCT
GCCTATACCG ATATAGTTGC CGAAATAGAT ACATCCCGTT TTTCGGATAC GGTTATTTTT
AGATTTTTTA GGTCGCAAGG AACGGTAGGG GAGCTGCTTC TTAGAGAGCT GCATGCACGG
CTAAAAGAAG TCAAGGGCGG AACAGGAATA TGTATGAGTG CCGGAACCTT TACTGAAGAA
GCTGTTAGGT TTTCTGAAGG AAGGCCATTG GACCTATACG ACAAAACAAG ACTCTCAAAC
GTTTTAAACT CCTTAAAATA A
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| Protein sequence | MVSTIIISFF IIIIAVVILV LVATRSKSPS SGGRKKVKGR AVLMKEASRR LAQNPHDIEG
LFIMGDIYYQ DQDWEKAYTA YSALLDRMKP LEMNKQLDVA IRYGICALKT NRLPEAKKGF
LLAETINPKN LDVSYNLGYI YYLEKDYEKA VKFFKRTLIL EPNSFLATKY LGYTLQHLHK
YTEALPALKK ALDFKPDDKE VLFAMGECFY ETEATDRCLK ILNHLRVDPV FGPQASLYTG
MIRAKADQLE RAIEDFQIGL KHTGIPMDIS NELKYRLAQA YIKTQEIGQA LHLLKEIQSI
SPGYKDAATL IMRYQELNKN KNLQIYLMSG QSEFVALCRK IVARFYPKAK VKIVDISVLA
AYTDIVAEID TSRFSDTVIF RFFRSQGTVG ELLLRELHAR LKEVKGGTGI CMSAGTFTEE
AVRFSEGRPL DLYDKTRLSN VLNSLK
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