Gene TDE2574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2574 
Symbol 
ID2741278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp2600516 
End bp2601154 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content41% 
IMG OID637161467 
Producthypothetical protein 
Protein accessionNP_973172 
Protein GI42528074 
COG category[R] General function prediction only 
COG ID[COG0218] Predicted GTPase 
TIGRFAM ID[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00175462 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA TAAATGCTGA ATTTATAAAG GGAGCCGTTA AGGCGGAACA GTTTCCGGAA 
ATCGGTGTTT CGGAATTCGC TTTTTTCGGG CGCTCCAATG CGGGAAAGTC GAGCCTTATA 
AATATGCTTG TCAACAGAAA AAATTTGGTC AAGACAGGCT CCCGCCCCGG AATGACGCGG 
GAAGTAAATT TCTTCTTGGT AAACCGGCCG GCCTCTTTAA ATTTTAACCC CAAGACAAAA 
AAGTTTTCAG GGCCGGCTCC AAAAGATATG TTTGTGCTCA CAGACCTTCC GGGCTACGGC 
TATGCAAAAC TTTCAGGCGG CATGACCTTG CAAATCGACA AGATGCTCTA TGAATATTGT 
ACAAACCGCC CCCTCTTAAA GATCATCTTT TTTTTAATGG ACATGAGGAG AGAACCTACA 
GAAACCGAAA AAGAAAGTAT CGGCTTTTTT CACGGCTTAA ATATTGAGGT TGTAATAGTC 
GGAACCAAGG CCGATAAGAT AGGCAAAAAT GATCAGATAA AGGCAAAAAA TGATTGGGCA 
GACTTCTTTA ACTTTGACGA AGAGCTCATT ATAATAAGCT CTGCTGCAAA AAAAACCGGA 
CGGGATAATA TTTTATCGTT AATCGCAAAA AGGATTTAA
 
Protein sequence
MKIINAEFIK GAVKAEQFPE IGVSEFAFFG RSNAGKSSLI NMLVNRKNLV KTGSRPGMTR 
EVNFFLVNRP ASLNFNPKTK KFSGPAPKDM FVLTDLPGYG YAKLSGGMTL QIDKMLYEYC 
TNRPLLKIIF FLMDMRREPT ETEKESIGFF HGLNIEVVIV GTKADKIGKN DQIKAKNDWA 
DFFNFDEELI IISSAAKKTG RDNILSLIAK RI