Gene TDE2522 details

Gene Information

• Locus tag: TDE2522
• ID: 2739034
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 2548238
• End bp: 2550064
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637161414
• Product: ABC transporter, ATP-binding protein
• Protein accession: NP_973120
• Protein GI: 42528022
• COG category: [V] Defense mechanisms
• COG ID: [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000536848
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAA GCGATACAAA ATTAAACCTT TTTAACAATA TCTTCTATTA TTTAGGAGTT 
TGGTTAAAAA CCTTCCCGGC AGGTATTTTC TTTATGCTTA TTTCGGTGCC TATCCGTATT 
TTTATGATTT ATCAAACAAT TCTTATCCCG AAAACCATTA TATTGGGTAT TGAAACCGGA 
ACGGAGGCTA AGCCGATTTT ACTTTCCATA TTGACGGCAG GGCTTTTGAT AACAGCCTGT 
AAAATTATCA TACAGGTACT TGAAACAAAG CTGATGGCTC TAGGCTCCCG TCCTCTATTC 
CATATTTACT CGGTACCTGT AAATAAAAAA ATGTTTGAGC TTAATTATCA AACCCTTATT 
TCTCCCGAAG TGCAAACAAA AATAACCAAG GTAAAAAACA TAGTCATGAC GGGAAGCTCG 
GGCGGCCACT TTCATTTTTT CGGACTCAAT TTATCCTTTC TTTTAACCGC AATTGCAGGA 
GCTTTTTTCT TCAGTTCAGG TATTATAAGC ATCGACTTAA TTCTTCTATT TATTGTCTTG 
GCTTCAGGAA CCGTAAATTT ACTGTACGGA ATCTATACGG GAAAATACAC ACAAAGAAAC 
ATGGAAGCCC GCGGCGATGA CGAAAAAAAA GAGAGCTACA TTCTTACAAC TGCGGAAGAC 
AGACGCTTTG CAAAGGACAT CCGCCTTTAT AAGATGAAAG ATTGGCTGAT CGAAAACTTT 
GAACACTATC ACGGACGAGT AAAAAAATTT TTGAGAGCAG AATCGAATGT ACAGGCAGGA 
GGAAAAATTC TAAATGCCTT AATGATTTTT ATAAGAGATG TTTTTGCTTA CATTTACTTA 
ATTTATCAAT TAAACGCCGG AACCATCGCC GTTTCTCAAT TTGTTTTTCT TATCGGCTTA 
GTCATGGAAT TCTCAAAATG GATGGACGCT ATTGTTCTTC AGATAAGTAA CCTCATTATA 
TTTAACAGTG AATTAAGTCA AATAAGAATC TTTTTGAACA CTCCCGATGA AAAAACAGGC 
GGAGGGCTTA CCGTAAATGA TACGGGCGAA AAACCTTCAA TCGAATTTAA AAATCTTTCC 
TTTAGATATT CGGAAAACGC AGCATGGATT TTTAAAGACT TTAATTTAAA AATTGATGCA 
GGAGAAAAGT TAGCTCTTGT AGGTATCAAC GGAGCGGGAA AAACGACTCT TATGCACCTT 
TTAATGGGAC TTTTAGACCC CACCGAGGGC TCCGTTTTAA TTGACGGAAA AAACAGTACG 
GACTTTAAAA AGACGGAATA CTATAATTTG TTTTCTCCGG TATTTCAAGA TATAAATATT 
TTTCCGGAAA CTTTTGCAGC CAATATTGCC GGAACGGAAA ATATAAATGA AGAAAAATTA 
AAAGATGCAA TTAATTCGAG CGGTTTAAAT GAAATGGTTT CAAATCTCCC GAATGGCAGC 
CAAACTATTT TAGTAAAAGA AAGCAATGAT GAAGCAATCG ATTTATCGGG AGGACAAAAT 
CAAAGGATGC TGCTTGCCAG AGCTCTTTAT AAAAATGCAA AAATAAATAT TCTGGATGAA 
CCGACGGCAG CCCTTGACCC GATTGCGGAA AGTAAAATAT ATGAAGAGTA TGATGCAATG 
AGTAAAGAAA AAACTTCTAT TTTTATTTCG CACAGACTCG CATCTACAAA ATTTTGTGAC 
AGGATTATTT TACTGGAACA CGGAAAAATA ATAGAAGAAG GCACTCATAA TGAACTTATG 
AGTCAAAATA AAACATACAG AAACATGTAT GATGTTCAAA GTAAGTATTA TAAAGAAAAT 
AAAGGAGATG AAAATGAAGA GGCTTAA 

 

Protein sequence

MEKSDTKLNL FNNIFYYLGV WLKTFPAGIF FMLISVPIRI FMIYQTILIP KTIILGIETG 
TEAKPILLSI LTAGLLITAC KIIIQVLETK LMALGSRPLF HIYSVPVNKK MFELNYQTLI 
SPEVQTKITK VKNIVMTGSS GGHFHFFGLN LSFLLTAIAG AFFFSSGIIS IDLILLFIVL 
ASGTVNLLYG IYTGKYTQRN MEARGDDEKK ESYILTTAED RRFAKDIRLY KMKDWLIENF 
EHYHGRVKKF LRAESNVQAG GKILNALMIF IRDVFAYIYL IYQLNAGTIA VSQFVFLIGL 
VMEFSKWMDA IVLQISNLII FNSELSQIRI FLNTPDEKTG GGLTVNDTGE KPSIEFKNLS 
FRYSENAAWI FKDFNLKIDA GEKLALVGIN GAGKTTLMHL LMGLLDPTEG SVLIDGKNST 
DFKKTEYYNL FSPVFQDINI FPETFAANIA GTENINEEKL KDAINSSGLN EMVSNLPNGS 
QTILVKESND EAIDLSGGQN QRMLLARALY KNAKINILDE PTAALDPIAE SKIYEEYDAM 
SKEKTSIFIS HRLASTKFCD RIILLEHGKI IEEGTHNELM SQNKTYRNMY DVQSKYYKEN 
KGDENEEA