Gene TDE2451 details

Gene Information

• Locus tag: TDE2451
• Symbol: queA
• ID: 2739636
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 2479972
• End bp: 2481015
• Gene Length: 1044 bp
• Protein Length: 347 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637161344
• Product: S-adenosylmethionine:tRNA ribosyltransferase-isomerase
• Protein accession: NP_973050
• Protein GI: 42527952
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)
• TIGRFAM ID: [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTACAA AAGAATTTAA CTTTGACTTA CCGGAAGAGC TGATAGCTCA ATCTCCCTCC 
GAAAAAAGAG GAGGCGACAG ACTTTTAATT TTAGACAAAC AAAGCGGAAA ACTTGAAGAC 
CGGCTTTTTA CGGAGCTGCC TGAAATCCTT CCCAAAAATG CCCTGATGGT TTTTAATAAC 
TCGAAGGTGC GTCATGCCCG CATTTATGCA AAGAGCAAAA CAAATGCAGT GTGCGAATTT 
TTAATGATTA ATCCTATGAG GGACTCGGAC GGTTCCCTTT GGCAGGTTAT GGCAAAAAAA 
GCAAAACGCC AAAAACCCGG GAAGACCTTT TTATTTGAAG ACGGAACTGA GGCTGAAATA 
ATCGAGTCCG AGATACCTCT CGAAAGCGAA TTCCGCTGTA TGAAATTCAA TAGGGTTATC 
GATGATGAGT GGCTCGATAA ATACGGGCAC ATGCCCCTGC CTCCCTACAT TCACCGAAAA 
GATACCCAAG AAGATGCAGA CCGCTATCAG ACCGTCTATG CAGAAATCTA CGGCTCGATT 
GCGGCTCCCA CTGCAGGCCT CCACTTTACC CAAGAGGTGC TTTCAAAAAT AAGGGATAAG 
GGAATCGATA TTGAATATGT AACCCTCCAT GTGGGACTCG GTACCTTTCT TCCCGTACGG 
GCTGAAAAAA TAGAAGACCA TAAGATGCAC ACCGAACATT TTTTTATTTC GGAAAAAACG 
GCTCAGGCCG TTGAAAAAGC CAAGAAGGAA GGAAGGCCTA TTATAGCCGT AGGAACGACC 
ACCGTGCGCA CCCTCGAATC CGCATGGGAC GAAAAAAGAA AAGAATTAAA ATGGGGCAAT 
CAGTCTACGG ATATTTTTAT TTACCCCTCA TATAAATTTA AACTGATAGA TAAGCTCTTT 
ACCAATTTTC ACACCCCCGA GTCGAGCCTC GTAATGCTGG TCTCCGCCCT TGCAGGAAAA 
GAAAATATTT TTAAAGCCTA CCGCCATGCC GTCGAAGAAA AATATAAATT CTTTTCTTAC 
GGAGATGCAA TGCTGATTTT GTAG 

 

Protein sequence

MLTKEFNFDL PEELIAQSPS EKRGGDRLLI LDKQSGKLED RLFTELPEIL PKNALMVFNN 
SKVRHARIYA KSKTNAVCEF LMINPMRDSD GSLWQVMAKK AKRQKPGKTF LFEDGTEAEI 
IESEIPLESE FRCMKFNRVI DDEWLDKYGH MPLPPYIHRK DTQEDADRYQ TVYAEIYGSI 
AAPTAGLHFT QEVLSKIRDK GIDIEYVTLH VGLGTFLPVR AEKIEDHKMH TEHFFISEKT 
AQAVEKAKKE GRPIIAVGTT TVRTLESAWD EKRKELKWGN QSTDIFIYPS YKFKLIDKLF 
TNFHTPESSL VMLVSALAGK ENIFKAYRHA VEEKYKFFSY GDAMLIL