| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2434 |
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| Symbol | |
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| ID | 2739859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2463390 |
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| End bp | 2465747 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637161327 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | NP_973033 |
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| Protein GI | 42527935 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00787871 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA AATTAAAATT TGCCTTACCG GTTTGCTTTA TTTTTTTTAT TTTGCTGAAC
CTCCATTCCG AGCTCTCTTT TGAATCTGCC GATATAAATA CTGAAGGCGA TATTTTATTC
GATATCAAGG CAGATGCTTA TGAGGGTTAT GCATATAAAA CCCTTTTTAA ATATTCGAAT
GAAAACAATA AAATAGAGCA GCTTACATTT TTCCCCGAAA AATTACAGCT TTTAGGAAAC
AATAAATTTT TACAGGTTTC AAACCGTTTC GGTATCATAA GGCTCGACCT CAAGTCAGGA
GCTGTCGATT CCCATTCCGA TTTTGAACCT CTTTCGGCAT CCAATTCTTC AAAGATAGGC
GCTCTTAACA ATATAAAAGC AAGCCCTGAC GGAAGATGGC TTACATTGGT CGAGCCCTCC
ACCCTTGTTT TCGGCCGGCT CGTACTGATG GACACCGATA CCGGCAGAAG ATATATATTG
AGTAACAAAA ATGTTCGAAA TGATCTTCCC GTATCTTGGT CGCCTGATTC AAAGATTATT
TTATATGAAG ATGATGGAGT AATTTATTTT GCCAGGCCTG AGTGGTTTTC GGAATCTGCC
TTTACTGATA AGAATTTTAG AAAACTTTCT CAAGGTAAAA TAAAGAATTT AAAATGGATT
TCATCTTCTG AATTTATTTT TTTATCGGGG AACGCTCTTT ACAGGGTTTC TTCCACAGAG
CTTTTTACAA AGGCTTTTTA TGCGCCCTTA TTTCCTGCCG GAAAGCTTGC TGCAAAAATT
CCTTCGGATT TTTCTCCGGC CTTTGATTCT ATTTTTATAG CACCTGACGG CAAGACGGCC
GTTTTTGTTA AAGGTAAAAG AAATGTTTAC CGCATTAAAC TGGATGGAGA CGATTATGTC
AATGTTTACT CCTCGGATTC TATTCCCTAT TTATTGCTTC CGGGAAATAC CGCTGAAGTT
TCCGTTCATT GGAAAGATAA TTCCCCAATT GTTTTTGCCG AAGGTCTTGC AGGCGGCTCA
AAAATTTTAA GGGCATGGCA AATTCTTCCT TCTTCTTCAA GTTTTGAAAA AATTCCCGTC
ACCGAAAAAA GCTCGTTTCT CGCAGCTTCG CCTAATTTTG AAGTTGCCGC TTTTAAGGAA
GACGAGGGAG TTGTTTTTTA TGATACTTCG CTCACGGAAG GAAACGGTGC GGCTTCATGG
AAAAAGCTCA ATGTTTTTTC GGATGAAAAA ATTTTCTCGG CTGTTTGGAA AAATAATTTT
ACCTTTTTTT TAGGCGGTGA AAATTATATT TACGAATATA ATCTTAACGA TAGTTCTTCC
GATGCAGGCA AGAAAAAGAT TTCCGTTTCG TCAATGCAGG ATTATAGCTG GGCGGACTCA
GGCAAGGAAA TTTTAATAAG TTTGAAGAGC GTCCGGAATA ATGAGCCGGA AGGCGATTCT
TCGGACTCCG ATGATGTAGA AGTCTTGCAA TATGTTTCAA ATTTAAAATG GACTCATTCT
TCAAAAAAAA TCATGCAAAA GAAAAACGCT AATCTTTCGG ATAGAATTTA CATAGATTCA
AATTCGGGCT ATTTTGCTAA TATGATTTAT ATTCGCCGTC TTAAAGATTT TATAACCCGT
CCGCTTTTGG AAGACGGAAA CTTTTTAAAG GAAAAAACTC AAAAAAAGAT TTCTTATGAA
AGTGCCAATT CTTCTTCCGT TTTTTCGCAT GGAAGCCGAA GCGGGAAAAA ACGGGTTGCC
TTAGTCTTTG ATGCCATGGA TGATATGGAC GGAATTGCGA GCATTCTTTA TACCTTAAAA
AAGAATAATA TAAGTTCAAC TTTTTTTATA AACGGTGAAG CGATGAGGCA AAACCCCAAT
GCCGTAAAAG AGATTGTAAA AAGCGGACAC CAATGCGGCT CCCTTTTCTT CACTACATGG
AATTTGAATG ATACGGCTTA TCGGATAGAC GATAATTTTA TAAAGCAGGG GCTGGCCCGT
AATGAGGATA ATTTTTATTC TCTTACAGGT TCCGAGCTTT CCCTTATCTG GCATACTCCT
CATTATATTT CTTCCTCCCT TATTGTAAAT GCAGGAAAAA ATGCCGGCTA TGTTTTTATT
TCGCCTGATG TGAGGGTGGC CGATTGGCTT AGCCCGGATG AAAAATTTGC CGTTCCTTCT
CTTTATAAGA CTTCTGCAGA ATTAATTGAA GATATAGCCG ATGCGGTTCA GCCGGGCTCT
ATAATTCCCA TACGCATTGG CAGAAGCCTT TCAACTAGGA GCGATTATCT TTATTATAAT
TTACAGCTTT TGATCGATGT TTTAACCGAA ATGGGGTATG AGATTACCGA TGTTAAAACC
TTGATGGGGC TTAAGTAA
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| Protein sequence | MKKKLKFALP VCFIFFILLN LHSELSFESA DINTEGDILF DIKADAYEGY AYKTLFKYSN
ENNKIEQLTF FPEKLQLLGN NKFLQVSNRF GIIRLDLKSG AVDSHSDFEP LSASNSSKIG
ALNNIKASPD GRWLTLVEPS TLVFGRLVLM DTDTGRRYIL SNKNVRNDLP VSWSPDSKII
LYEDDGVIYF ARPEWFSESA FTDKNFRKLS QGKIKNLKWI SSSEFIFLSG NALYRVSSTE
LFTKAFYAPL FPAGKLAAKI PSDFSPAFDS IFIAPDGKTA VFVKGKRNVY RIKLDGDDYV
NVYSSDSIPY LLLPGNTAEV SVHWKDNSPI VFAEGLAGGS KILRAWQILP SSSSFEKIPV
TEKSSFLAAS PNFEVAAFKE DEGVVFYDTS LTEGNGAASW KKLNVFSDEK IFSAVWKNNF
TFFLGGENYI YEYNLNDSSS DAGKKKISVS SMQDYSWADS GKEILISLKS VRNNEPEGDS
SDSDDVEVLQ YVSNLKWTHS SKKIMQKKNA NLSDRIYIDS NSGYFANMIY IRRLKDFITR
PLLEDGNFLK EKTQKKISYE SANSSSVFSH GSRSGKKRVA LVFDAMDDMD GIASILYTLK
KNNISSTFFI NGEAMRQNPN AVKEIVKSGH QCGSLFFTTW NLNDTAYRID DNFIKQGLAR
NEDNFYSLTG SELSLIWHTP HYISSSLIVN AGKNAGYVFI SPDVRVADWL SPDEKFAVPS
LYKTSAELIE DIADAVQPGS IIPIRIGRSL STRSDYLYYN LQLLIDVLTE MGYEITDVKT
LMGLK
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