| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2294 |
|---|
| Symbol | |
|---|
| ID | 2740259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 2332699 |
|---|
| End bp | 2333400 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637161183 |
|---|
| Product | HAD superfamily hydrolase |
|---|
| Protein accession | NP_972894 |
|---|
| Protein GI | 42527796 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTACG GTATTTCTGC TATAGCATTT GACATTGACG GTACGCTTTA TCCTTCATGG
CGCTTTAATT TACGTATAAT TCCATTTCTG TTAAAAAATT TTAATTTTAT GTCTGCTTTT
AACAAGACCC GAAAAGATAT AAGACTTTGG CAGGAAAAGA ATCCCGATAA AGTTTTAAGC
AACTTTTTTG ATTTTCAAGC CGAAATCTTG GCAAAACACG CAGGAAAAAA TAAGGAAGAT
GTTAAAAACT TTTTGGAGAC GGAAATTTAT GAGGGCTGGA AAAAGCGTTT TGCAAGGATA
AAACCTTACT TTTTTGCAAG GGAATCTATA GAGGAATTTA AAAGATGCGG GCTTAAAATA
GCCCTTCTTT CGGACTTTTT ACCGGAACAA AAAAATGATG TGTGGGGTAT TTTACCCCTC
TGTGATGCCG CTTTCGGGAC AGAGGCTATA GGGGCCTTAA AACCTTCTCC TCTCCCCTTT
AAACGGTTGG CAGAAGCCCT TGATCTGCCT TGCGATAAGA TTCTCTATGT GGGAAACAAT
CTCAGGTACG ATGTTGCAGG GGCCAAGGCA GCAGGAATGC ACACTGCCTG CATAAAGAGC
AGGTTATTTA TCTTACTTAA AAAAGTTTTT GCTCAAAAAG ATAATGAAAA ACCGGATATT
TATTTTTCAA ACTATCGCCA ATTATTGAAA TTTATGATAT AA
|
|---|
| Protein sequence | MKYGISAIAF DIDGTLYPSW RFNLRIIPFL LKNFNFMSAF NKTRKDIRLW QEKNPDKVLS
NFFDFQAEIL AKHAGKNKED VKNFLETEIY EGWKKRFARI KPYFFARESI EEFKRCGLKI
ALLSDFLPEQ KNDVWGILPL CDAAFGTEAI GALKPSPLPF KRLAEALDLP CDKILYVGNN
LRYDVAGAKA AGMHTACIKS RLFILLKKVF AQKDNEKPDI YFSNYRQLLK FMI
|
|---|
| |