| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2195 |
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| Symbol | |
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| ID | 2740217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2231261 |
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| End bp | 2231971 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637161085 |
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| Product | RNA pseudouridylate synthase family protein |
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| Protein accession | NP_972796 |
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| Protein GI | 42527698 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACAATG AAGTAAGAAT TTTATTTGAG GACAATTTTT TTGCAGTAGT TTTAAAAAAC
TGCGGGGACA ATTCTCAAGT CTTTTTTAAA AAGGCCTTTA GCGAAAAAAA ATATGCCGAG
GCTGTAAACC GATTGGATAA ACCTGTCAGC GGTTTAGTTC TTATAGCTTT TTCTCCTGCG
ATGCACACAA AACTAAATAA TCTTTTTAAA GAAAAAAAGA TAAAAAAAGA ATATTGGGCA
ATCTGTAAAA AAATAGAAGA ACTAAAATCG GCGGCCGATT CGAAAATAAG CGACACAACT
CCCGTTCTTT ATAAAAAAGA ATTTTGCGAA AACTATCTTG AATTCAATAC CAAAATACAA
AAAGCTTTTG TAACGGAATC AAGGCAAAGA GGAAAAAAGG CATCTCTTTA TTGGCAGCTT
GCAGGGATTG GCGACAACTA TAATTTTTTA CGCATATTCC CCGAAACAGG CCGCACCCAT
CAAATCCGTA TTCAGCTTTC TCATTTGGGT ATGCCCATAA AGGGAGACAT CAAATACGGC
TTTGCGCGTA CCGAAAAATC CGGCGGGATC AGGCTCCACG CCCAGTCCCT AAAATTCGAA
CATCCCGAAA GCAAAAAACG AATAGAAATT TCAGCCCTAC CCCCCTCTCC CGACACTCTA
TGGTCAGCCT GCATCGAAGT CTGCTTAAAA GCAAAAGAGC TTGAAGAGTA A
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| Protein sequence | MHNEVRILFE DNFFAVVLKN CGDNSQVFFK KAFSEKKYAE AVNRLDKPVS GLVLIAFSPA
MHTKLNNLFK EKKIKKEYWA ICKKIEELKS AADSKISDTT PVLYKKEFCE NYLEFNTKIQ
KAFVTESRQR GKKASLYWQL AGIGDNYNFL RIFPETGRTH QIRIQLSHLG MPIKGDIKYG
FARTEKSGGI RLHAQSLKFE HPESKKRIEI SALPPSPDTL WSACIEVCLK AKELEE
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