| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2174 |
|---|
| Symbol | |
|---|
| ID | 2740196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 2203189 |
|---|
| End bp | 2204124 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637161064 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_972775 |
|---|
| Protein GI | 42527677 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAG AAATCAAAAC AATAGAGAAA GATGGATATA ACGGCGTATA CTGGCCGAAT
CCGAACGGCA GTAAATATTG CATGATTGCC ATGCTTGGTG ATGATACAAA AGACATGATG
GCAAAGGGTG GCGTCAAATG GCTTCAAAAG AAAGGTCTGA ACGTCCTCAC AATGTCACCG
GCCCCAAAAG ATTACGGTCA CCATAACTAT CCACTCGAAC GTTTTGAGAA GGCACTTGCA
TTTCTGAAGA CGATGGGCAA TGAAGAAATC GGTATTATGG GTGCCTCGAC AACTGGTATG
CTTGCGCTTG TCGCAGCGTC ATACTTTTCG GAAATAACGC TTACGATAGC CATTTCTCCT
TCTGATTTTG TGATGGAAGG TTTTTATCAG GATGGGAAAG ACGGGGCTCA CGAACGTCCG
GGAGACGGAG AGTCATCTGT TTCATATCAC GGTAAGCCGC TTCCTTATCT GCCCTATGCG
TATCGCCATC CGGAATACTG GCAGAAAATA TCTGAGGAAA CCAAACGGCG TGGCGCGATG
GTTGCCAGTC GCGATTTGTT CGATGAATCG GAGAAAAGGC ATCCCGTGCA GGAAGCCGAG
AAAATAAAGG TGGAGAATAT AAAGGGTCGC ATTCTGCTGA TTGGTGCGGA GGATGATGTA
CTTTGGGATA CCTGTAAATA CATTCGTAGA ATGGAAAACA GGCTGAAAGA AAGGGACGCG
GATAACAGTG TAGTTCTCAT GACCTATGAA CATGGAACGC ATTTTATTTT TCCGCAGACC
ATGTTAACAG GCATTCTTCC TGTGGGTTCC GGGCTGTTTA TCAGCATGGC TTTTAAGGAG
GCAAAGCAGT ATCCTAAAGA GTGTAAGCAG ACGAGGATTG AAGTTGATGA GCGCTTATCG
GAGGAACTAA AGCAGTGGAT AAATTCGGCT CGATAA
|
|---|
| Protein sequence | MKKEIKTIEK DGYNGVYWPN PNGSKYCMIA MLGDDTKDMM AKGGVKWLQK KGLNVLTMSP
APKDYGHHNY PLERFEKALA FLKTMGNEEI GIMGASTTGM LALVAASYFS EITLTIAISP
SDFVMEGFYQ DGKDGAHERP GDGESSVSYH GKPLPYLPYA YRHPEYWQKI SEETKRRGAM
VASRDLFDES EKRHPVQEAE KIKVENIKGR ILLIGAEDDV LWDTCKYIRR MENRLKERDA
DNSVVLMTYE HGTHFIFPQT MLTGILPVGS GLFISMAFKE AKQYPKECKQ TRIEVDERLS
EELKQWINSA R
|
|---|
| |