Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2109 |
Symbol | |
ID | 2740348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2133665 |
End bp | 2135377 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637160999 |
Product | DEAD-box ATP dependent DNA helicase |
Protein accession | NP_972710 |
Protein GI | 42527612 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAATTA CTTTTAAAGA ATTGGGACTT GACGATATAG TCCTGCAAGC AGTTGAAGCC AAGGGTTTTG AAGAACCTAC TCCTATTCAG GTTTTGGCTA TTCCCCGCCT TCTTTCAGGA GAAGCAAATG TTATCGCTAA GGCTCGGACA GGAACGGGAA AGACGGCAGC CTTCGGCCTT CCCCTTGTGC AAGAGCTGCG TTCAAATACC GGAAAGGTGA GAGCCCTTAT TTTGGTTCCT ACCAGAGAGC TGGCCGTTCA AGTTGCCGGC GAACTTGAAT CTTTTAGAAT AGAAGAATAT CCCCGTATCG CAACCGTTTA CGGAGGAGCG GCGATAGGCC CTCAACTTAG AAGCCTAAAA ACAGGTGTCG AAATCGTTGT AGGAACTCCC GGCCGCATAA TGGATCATCT TGAGCGGGGC TCCCTAAAAA TCGAAGATAT AGAATATTTT ATTTTGGATG AAGCCGATGA GATGCTTAAC ATGGGCTTTA TCGAAGACAT AGAAAATATC TTTTCAAAGG CAAATCCTGA AGCCCGTGTT TTAATGTTTT CGGCGACGAT GCCAAAGCAG ATACTGAGCA TAGCTTCAGA CTTTATGGGC GACTATGAAA TTGTCGAAGA AGAACCTCAA GAAGAAAGAG CTTCTTTAAC GGAACAATTT TTTTGGGTTG TAAGGGAAGG GGATAAAACC GAAGCCCTTG TCCGTCTTAT AGATACGAGC CCTAACTTTT ACGGCCTCGT ATTTTGCCAA ACAAAAATCG ATGCCGATGA TGTTGCAAAG GAACTTGACG AAAGGCACTA CGAAGCTGCC GCCCTCCACG GGGATATTCC TCAAAGCCAA AGGGAAAAAA TATTGGAACG CTTTAGATCA AAAAAGACCC GCATTCTTGT TGCAACCGAT GTTGCCGCAA GGGGTATAGA CATCGAGGGA ATTTCCCATG TTGTAAACTA TGCAATTCCT TATGACGGGC CGACCTATAC CCACCGTATA GGAAGAACGG GCAGGGCAGG AGCGGCAGGG GTTGCAGTCA GCTTTGTACG CCCTAATGAG GTAAAAAGAA TCGAGTACCT GCGCAAACAT GCCCGCGGAG AATTAAAAGA AGGCAAAATT CCTTCAATCG AACAAGTCAT CGAAATCAAG CGTACCCGTA TCTTAAAAGA AACGGCTGCC CAAATCGAAA AACGCATTAG CGAAGAAAAA CCCGAACAGG GCTTTGCAGC CTTTGCAAAT AAACTCACGG AATACGGAGA TGCTCAAACC GTTCTCTCCT TTATTCTTCA AATGCAGTAC GGCTCGTTTT TATCGCCTGC TCATTATAAA ACAATCAAGC CTGTGCGTTC CGAAGGGAAG GCGCGAAAAT CTGATGACGA TTCTTTGCGT CTTTATATAG GTGTGGGCCG AAAAGACGGC ATCACAAAGC GAAAACTTGC CGAAATGCTA AGCCGGCTTC TTTCAATCCC CGAACGGCTT GTAGATGATA TAGAGGTTAT GGATAAGTTT TCCCTTGCTA CTATGCCTAA AAATGCTGCA AATGATGCTC TGCGCCTATG TAAAAAGAAA AGGGGCTTGC CTCATATGCA TATTGATGTA AAAAGTGAGG CTCCGACTAA TTACGGTTCT ATCGGTAAGG GAAAAAGAGG ACAAAAACGG AAAAACGGAA CACAAAGAAA AAAAGAAGGT TTAAGCTCTG CTTCAAAGTA TAAGCGTAAA TAG
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Protein sequence | MLITFKELGL DDIVLQAVEA KGFEEPTPIQ VLAIPRLLSG EANVIAKART GTGKTAAFGL PLVQELRSNT GKVRALILVP TRELAVQVAG ELESFRIEEY PRIATVYGGA AIGPQLRSLK TGVEIVVGTP GRIMDHLERG SLKIEDIEYF ILDEADEMLN MGFIEDIENI FSKANPEARV LMFSATMPKQ ILSIASDFMG DYEIVEEEPQ EERASLTEQF FWVVREGDKT EALVRLIDTS PNFYGLVFCQ TKIDADDVAK ELDERHYEAA ALHGDIPQSQ REKILERFRS KKTRILVATD VAARGIDIEG ISHVVNYAIP YDGPTYTHRI GRTGRAGAAG VAVSFVRPNE VKRIEYLRKH ARGELKEGKI PSIEQVIEIK RTRILKETAA QIEKRISEEK PEQGFAAFAN KLTEYGDAQT VLSFILQMQY GSFLSPAHYK TIKPVRSEGK ARKSDDDSLR LYIGVGRKDG ITKRKLAEML SRLLSIPERL VDDIEVMDKF SLATMPKNAA NDALRLCKKK RGLPHMHIDV KSEAPTNYGS IGKGKRGQKR KNGTQRKKEG LSSASKYKRK
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