Gene TDE2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2062 
Symbol 
ID2741189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp2087892 
End bp2088434 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content46% 
IMG OID637160953 
Producthypothetical protein 
Protein accessionNP_972664 
Protein GI42527566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0102746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TATTTATCGT ATTTGTTTTA ATGATGTGTT CTATTATGCT TTTTGCACAT 
TCGCCCCTAT TGACCGTTGA AGATAACGGA GACGGAACTA TCTATGTTCA AGGCGGATTT 
TCAAATGGAG CTTCGGCTGC CGGTGTTAAA CTTTATCTTA CCGATAAGGC TTCAGGGCAA 
AAAATCTGGG AAGGAGAATT CCCCGATGTA GGCGAACTCA ACCTGCCTAT CCCGAATGTT 
CCTTATACTG TAACCTTTGA TGCAGGGCCG GGCCATATTA TCGTAAAAGA CGGTCCCGAA 
CCCGAAGGCG GTTTCGGCAG TCAGGCTGCT TCTTCTGAAG CCGCAGGAGA AAACGAGTCA 
GCCGGAGATG TTGCTCAGGC TCAAAAACCC GTTGCTGTCT CCGGTTCCGC AGGTTGGGTT 
CCTATGGATA CCGTTTCGGC AATGCCTAGT GTCGGTCCTT CGTTTACGGC AATCTTGGCC 
CTTGTACTTG CCGTAATAAA TTCGATACTG ATTGTCTTCC TCTTTAAAAA ACAAAAAAGG 
TAG
 
Protein sequence
MKKIFIVFVL MMCSIMLFAH SPLLTVEDNG DGTIYVQGGF SNGASAAGVK LYLTDKASGQ 
KIWEGEFPDV GELNLPIPNV PYTVTFDAGP GHIIVKDGPE PEGGFGSQAA SSEAAGENES 
AGDVAQAQKP VAVSGSAGWV PMDTVSAMPS VGPSFTAILA LVLAVINSIL IVFLFKKQKR