Gene TDE2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2014 
Symbol 
ID2740361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2035525 
End bp2036511 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content32% 
IMG OID637160904 
Productankyrin repeat-containing protein 
Protein accessionNP_972617 
Protein GI42527519 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA GGAAATCTAA TACTTCAAAA ATTATTTTTA TTTTATTATG TTCATTTATA 
TGTCTCATTA TTATTTTTAA CCCTGTAACG CTATATACGG TAGGCTGGCT AAGTGTAAAA
ATAATGGGTT CGATGGGAAA TTTATTTAAT TCTGCTGATC CGTCCATATC AATTAATATT
TTTAAGAATA CTCCTGCATG GGATTTGGCA AAAGCAGTTA ATTCGCAAAA TATAAAAAAA
ATAAATCAAA TTTGTTCTGA GAACAAAGAA TTGATAAATT ACCGTGAGCC TCTTTATGGT
ACACCTCTGT TGTATTGGGC AATTGTAAAC AGTAAGTATA ATTCAGCAGA AATATTACTT
AAAAACGGAG CTGATCCTGA TCTTATGCAG CGTGCATCAA ATAACACGCC TCTGCATTTA
GCAGTTGGCA AGCGGTGGAA AGGCAAAAGT ATTGATATGA ATGAAAATAT TAAATATACG
AAACTATTAT TAAAATATGG TGCAGATCCG AATATTCCAT ATTTTGAAGA ATCTTATGGT
GACAGAACCG TATTGATGAA TGCAATATTT ACAGGAGATA GTAAGTTATT GGTAGAGCTT
CTGATTAATA ACGGCGCCGA TATCGATGCA CGGCGAAATG CAGGTACTAC TGCTGCAAGC
CTCGCTTTAC GTTTGAAGAG ATATACCATT GCTCATTATC TTATAGTAGA ATGCCATGCT
GATATAACTG AAGCATGTTA TGACCCTATG ATAGATAAGA ATTTGTATAT ATCACGAAAA
GAAAAAATAT ATCCTGTAAA TATCTTACGT GATTATTCTT GGGTGTTTCC GTTAGATAGT
AAAGAATATA AATTAAAGCA GGATATAATC GCCGAATTTA AAAGACAGGG TGTCGATTAT
TATGCAACGC CTATTTCTGA TAGAACGAAG TATCATATAA AATATACCTA TCCTGATAAT
TATGAGGAAA TGCTTGAAAA ATTTTAA
 
Protein sequence
MKIRKSNTSK IIFILLCSFI CLIIIFNPVT LYTVGWLSVK IMGSMGNLFN SADPSISINI 
FKNTPAWDLA KAVNSQNIKK INQICSENKE LINYREPLYG TPLLYWAIVN SKYNSAEILL
KNGADPDLMQ RASNNTPLHL AVGKRWKGKS IDMNENIKYT KLLLKYGADP NIPYFEESYG
DRTVLMNAIF TGDSKLLVEL LINNGADIDA RRNAGTTAAS LALRLKRYTI AHYLIVECHA
DITEACYDPM IDKNLYISRK EKIYPVNILR DYSWVFPLDS KEYKLKQDII AEFKRQGVDY
YATPISDRTK YHIKYTYPDN YEEMLEKF