Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2014 |
Symbol | |
ID | 2740361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2035525 |
End bp | 2036511 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637160904 |
Product | ankyrin repeat-containing protein |
Protein accession | NP_972617 |
Protein GI | 42527519 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTA GGAAATCTAA TACTTCAAAA ATTATTTTTA TTTTATTATG TTCATTTATA TGTCTCATTA TTATTTTTAA CCCTGTAACG CTATATACGG TAGGCTGGCT AAGTGTAAAA ATAATGGGTT CGATGGGAAA TTTATTTAAT TCTGCTGATC CGTCCATATC AATTAATATT TTTAAGAATA CTCCTGCATG GGATTTGGCA AAAGCAGTTA ATTCGCAAAA TATAAAAAAA ATAAATCAAA TTTGTTCTGA GAACAAAGAA TTGATAAATT ACCGTGAGCC TCTTTATGGT ACACCTCTGT TGTATTGGGC AATTGTAAAC AGTAAGTATA ATTCAGCAGA AATATTACTT AAAAACGGAG CTGATCCTGA TCTTATGCAG CGTGCATCAA ATAACACGCC TCTGCATTTA GCAGTTGGCA AGCGGTGGAA AGGCAAAAGT ATTGATATGA ATGAAAATAT TAAATATACG AAACTATTAT TAAAATATGG TGCAGATCCG AATATTCCAT ATTTTGAAGA ATCTTATGGT GACAGAACCG TATTGATGAA TGCAATATTT ACAGGAGATA GTAAGTTATT GGTAGAGCTT CTGATTAATA ACGGCGCCGA TATCGATGCA CGGCGAAATG CAGGTACTAC TGCTGCAAGC CTCGCTTTAC GTTTGAAGAG ATATACCATT GCTCATTATC TTATAGTAGA ATGCCATGCT GATATAACTG AAGCATGTTA TGACCCTATG ATAGATAAGA ATTTGTATAT ATCACGAAAA GAAAAAATAT ATCCTGTAAA TATCTTACGT GATTATTCTT GGGTGTTTCC GTTAGATAGT AAAGAATATA AATTAAAGCA GGATATAATC GCCGAATTTA AAAGACAGGG TGTCGATTAT TATGCAACGC CTATTTCTGA TAGAACGAAG TATCATATAA AATATACCTA TCCTGATAAT TATGAGGAAA TGCTTGAAAA ATTTTAA
|
Protein sequence | MKIRKSNTSK IIFILLCSFI CLIIIFNPVT LYTVGWLSVK IMGSMGNLFN SADPSISINI FKNTPAWDLA KAVNSQNIKK INQICSENKE LINYREPLYG TPLLYWAIVN SKYNSAEILL KNGADPDLMQ RASNNTPLHL AVGKRWKGKS IDMNENIKYT KLLLKYGADP NIPYFEESYG DRTVLMNAIF TGDSKLLVEL LINNGADIDA RRNAGTTAAS LALRLKRYTI AHYLIVECHA DITEACYDPM IDKNLYISRK EKIYPVNILR DYSWVFPLDS KEYKLKQDII AEFKRQGVDY YATPISDRTK YHIKYTYPDN YEEMLEKF
|
| |