Gene TDE1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1973 
Symbol 
ID2741536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1987329 
End bp1987796 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content33% 
IMG OID637160863 
ProductCvpA family protein 
Protein accessionNP_972576 
Protein GI42527478 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATAG GAAGTGCCGA TATAGTTTTT TTGATTATAT TAAGTTTTTT TGTTATTAAG 
GTTACCGTAA CCGGTTTTAT AGACGAGTTT TTTTCAAAGG CTGCGGTTAT TGTCGGCGGA
CTTGTAGCTT TTTTGTTTTA TAAATTGCTT ACCCCTGTAA TTACCGAGCT TCTTGGAGGA
AAATCCTTAT CTGCCGTGAT AGCCTTTTTG ATTTTATTTT TATCTACTTA TTTGATTATA
AAATTGGTTC AAGTTTTTTT AGGCTCCCTT TTTTCAAGCG AGTCATTAAA AAATTTGGAC
AGGTCATTAG GTTTTTGTCT GGGCCTTGTA GAAGGCTTGA TTGTCATAGG AGTTATCCTC
ATGCTTATCA ATATCCAAAC CTTTGTTTCA TTCGATAAAA TATTAAGTGA AAGCATTTTT
GCGAAAATCC TTTCTCCATT TATTTTAGAT ATTACCAAGC AGTTTTAG
 
Protein sequence
MRIGSADIVF LIILSFFVIK VTVTGFIDEF FSKAAVIVGG LVAFLFYKLL TPVITELLGG 
KSLSAVIAFL ILFLSTYLII KLVQVFLGSL FSSESLKNLD RSLGFCLGLV EGLIVIGVIL
MLINIQTFVS FDKILSESIF AKILSPFILD ITKQF