Gene TDE1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1926 
Symbol 
ID2740166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1942635 
End bp1943723 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content37% 
IMG OID637160812 
Producthypothetical protein 
Protein accessionNP_972529 
Protein GI42527431 
COG category[S] Function unknown 
COG ID[COG4769] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.777208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGGCTGC GGGTGCTCAG GTTGTCATTA AAAACCAAAA AGGCGGATAC CCTTATTCCA 
TTGTTCGGAG GATTTTGTTT TTTTCTTTCG GCAATCGAGA TAATGATACC CAAGCCGGTT 
CCTTTTTTTA GAATCGGCTT GGCTAATCTG CCCGTAATTT TAGGCATAGA CCTCTTCTCT 
TTTCCGGCCT TTGTACTTCT TTTAGTTATA AAAGTTTTAG GCCAAGCCCT TATTTCGGGA 
ACGCTTTTTT CTTATATCGT TCTTTTTTCA GCAATCGGAA CATTTTCTTC GGGTCTGTTA 
ATGTATGCCA TGAGAAAAAT TCCGAGAAAA ACAATTTCCT TTATGGGTAT AAGTTTGGCA 
GGAGCCTTTG TTTCAAACAG CCTGCAATTT CTTTTAGCAG TCTTACTCAT GTTCGGAAAA 
TCGGCTGTCT ACATAATTCC GCCCGTATTT TCTTTAGGCA CCTTAACAGC CTTATTTTTA 
GGTTGGTTCG CATCCGAATT TGAAATACAA TCCGTCTGGT ACCAAAGAGT AAAGGCCGAA 
AGGTTCGATT TTGTCCCTGA TAATTCACAA GCGGTAAGGC ATTATAAGAG TGAAAACGAA 
TCGGAAAAAA CAAAAAGCCG GACTTTAAGG GACAGGTATC TTAGAATAGG TTCCGGTATA 
AGCCTTTTTT TAATCTTACT CTTTGTTCCT TTTTTGCCGG TACAAGCCCT TGTCTTGGGA 
GCAGCCCTGA TTCTTTGTGC AGCCGACAAA CAAAAACTTA ATTTTTTAAA TTTAATCTTT 
ATGTTTACGG CAATTACCGT TTTCAACCTT TTCCCGCCCA TGGGCAAGAT AATTTTTAGC 
ATAGGAAGTA TAGATATAAC TCATCAAGCC CTATTACGCG GATTTGAAAA AGCTATTGTG 
TTGTTAGGAA TGATATATAT ATCGAAATGG ATGCTGAAAG CAAAAATGAA TTTTAAAAGC 
CGAATAGGAA AATCGATACA GGAAGCTTTC GATGTATTTT ACAAATTATT ATCGGTAAAA 
CATGAAATCA AACCCAAAAT GATAATTCCC ACAATAGATT CGGTACTTTT AAGTATAAAC 
AGACTTTAA
 
Protein sequence
MRLRVLRLSL KTKKADTLIP LFGGFCFFLS AIEIMIPKPV PFFRIGLANL PVILGIDLFS 
FPAFVLLLVI KVLGQALISG TLFSYIVLFS AIGTFSSGLL MYAMRKIPRK TISFMGISLA 
GAFVSNSLQF LLAVLLMFGK SAVYIIPPVF SLGTLTALFL GWFASEFEIQ SVWYQRVKAE 
RFDFVPDNSQ AVRHYKSENE SEKTKSRTLR DRYLRIGSGI SLFLILLFVP FLPVQALVLG 
AALILCAADK QKLNFLNLIF MFTAITVFNL FPPMGKIIFS IGSIDITHQA LLRGFEKAIV 
LLGMIYISKW MLKAKMNFKS RIGKSIQEAF DVFYKLLSVK HEIKPKMIIP TIDSVLLSIN 
RL