Gene TDE1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1881 
Symbol 
ID2739110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1903140 
End bp1903691 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content40% 
IMG OID637160767 
Productmethyltransferase, putative 
Protein accessionNP_972484 
Protein GI42527386 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.752838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAA CCGGCGGCAG TTTAAAAAAC AGGCAGGTAG AATGCCCCAA GGGAATAATA 
CGCCCCGCAA TGGATAGAAT GAGGGAGTCT GTTTTTTCCA TACTTGGAGA CCTTTCAGGT
CTTTCTTTTT TAGACCTTTT TACGGGCTCA GGAGTCTGCG GTTTGGAAGC CTACTCGCGC
GGAGCCTACC CTGTCTATCT TGTAGAAAAA GATGCCGATA AATTCCCCGT TTTATTAAAA
AACGTTTCAA TGGCAGATAA AAAGCTTGAA TGTAAAAGGA TGCCTGCAGA AACATTTATA
AAAAGAGCTA AGGAATCATT TGATATTATC TACCTCGACC CTCCCTTTCC CTATAAATTT
CACATAGAAC TTCTCGAAAA AATAGAAGAA TCAAAAATAT TAAAAGAAGG AGGCCTTGTG
ATGATGCACA GGCCATCCGA AAAGGCTATG CCTCAAACAA TAGGCTCTTT GACAAAAAGC
GATGAAAGGG TATATGGAAG ATCCATCGTG GACTTTTATC GTAAAAAAAT TCCTGGAGAA
AATGATGTTT AA
 
Protein sequence
MRITGGSLKN RQVECPKGII RPAMDRMRES VFSILGDLSG LSFLDLFTGS GVCGLEAYSR 
GAYPVYLVEK DADKFPVLLK NVSMADKKLE CKRMPAETFI KRAKESFDII YLDPPFPYKF
HIELLEKIEE SKILKEGGLV MMHRPSEKAM PQTIGSLTKS DERVYGRSIV DFYRKKIPGE
NDV