| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1877 |
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| Symbol | |
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| ID | 2739106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1897750 |
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| End bp | 1898523 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637160764 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | NP_972481 |
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| Protein GI | 42527383 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0475386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCTGC TGATTGTTTC CGCAGAGCCG GATAAGGATA TAATTCGGCT CGATAAAAAA
GATTATAACT ATCTTGTTTC CGTGCGGAGA ATTAAAGAAG GGCAGGTTTT AAAGATTTCT
TTAAATGGAG TTAAGCCTGC CTCGGCTGAA GTTTTTAAAA TTAATACCGA AAAAAAATAT
ATAGAGCTTA GGCTCTTAAA GGAAGAATTT GCCTTTGATG CGGAACCTTA TAAACCCCGT
GCAGAAATTA TTTTAATGCA ATGGCTTATA AAGGGGAATC ACATGGATAT TGCAGTGAGG
CAGGCTGCAG AAGCCGGCTG TTCGCTTATT GTTCCTGTTT TGGGAGAATT CTCTGTTGTA
AAAAAAGAAA ACATAAATCA AACCGAAAGG CGCGAGCGTA TTATCAGAGA GGCAAGACAG
CAGTCAGGTT CCGTTGTAAA TACTAAAATT CTTCCTGCCC AAGAATTGAA AGCGGCTTTG
GATTCGGTTT TGGACTATAC GGCGAACAGG AAAACCGCTT TTATAATGCT TAGCGAAAAA
AAGGTAGGCT CGTTTAGTTT TTTTGACTGC TTATCGGCCG AGACCGAGGC GATAGTGCTT
GCCATAGGCT GCGAAGGCGG CATAGGTTCT AAAGAAATTG AATTTTTAAA AGAACATAAA
TTTGAAGAAG TGCATTTTAA TACAAATGTG CTCCGTGCCG AAACGGCGGC AATTTATTCG
ATTGCGGCCG CTCAGGTTAT AATGGAGGAA AAAGGTGGCT GTAAAAAGAA TTAA
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| Protein sequence | MKLLIVSAEP DKDIIRLDKK DYNYLVSVRR IKEGQVLKIS LNGVKPASAE VFKINTEKKY
IELRLLKEEF AFDAEPYKPR AEIILMQWLI KGNHMDIAVR QAAEAGCSLI VPVLGEFSVV
KKENINQTER RERIIREARQ QSGSVVNTKI LPAQELKAAL DSVLDYTANR KTAFIMLSEK
KVGSFSFFDC LSAETEAIVL AIGCEGGIGS KEIEFLKEHK FEEVHFNTNV LRAETAAIYS
IAAAQVIMEE KGGCKKN
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