Gene TDE1863 details

Gene Information

• Locus tag: TDE1863
• Symbol: ruvA
• ID: 2740052
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1888064
• End bp: 1888669
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637160750
• Product: Holliday junction DNA helicase RuvA
• Protein accession: NP_972467
• Protein GI: 42527369
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0041626
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAACA GCATTTCAGG AATTTTAAGC GGAAAAACAA CCGATTCCGT CTATGTTGAA 
AATTCAGGTA TTGAGTGGGA AATCTTTGTT TCGGCCTTGG CCCTCGATGC CTTAGGCACT 
GTCGGAAAAG AGGTAAAGGT TTATACATGG CTTTATCACA GGGAAGACCA GATGAGGCTT 
TTCGGCTTTC CCAATCAGGC AGAACGCTCC TTGTTTTTGG ATCTTACAAA GGTTGAGGGG 
GTAGGGCCCC GTCAAGCCTT AAAGATAATG TCGGGGCTTA ATTCATCTTC CCTTGAAAAA 
GCCTTGGAGG AAGGCGACCT TGACACCCTT CAAAAGGCTC CCGGAGTAGG CAAAAAGACT 
GCCCAAAAAA TGATTCTTGC CTTAAAAGGA AAACTTACCA ATCTAAACGA AGTTTCCTCA 
AAGGGGCAGG CTTCCGTTTC TTGCGAATAT GAAGACATAG TTACGGCCTT AACCGAAATG 
GGCTTTGAAA GAAAATCCGT AATCGTTCAA GTCGAAAAAA TAGCCGAAGA AATGAAGGCC 
GCAGGTTCCG ATCCTCTTAA AAACGAAGAA GAACTTTTTA GACGCTCAAT CGTCGCTTTG 
AGTTGA 

 

Protein sequence

MFNSISGILS GKTTDSVYVE NSGIEWEIFV SALALDALGT VGKEVKVYTW LYHREDQMRL 
FGFPNQAERS LFLDLTKVEG VGPRQALKIM SGLNSSSLEK ALEEGDLDTL QKAPGVGKKT 
AQKMILALKG KLTNLNEVSS KGQASVSCEY EDIVTALTEM GFERKSVIVQ VEKIAEEMKA 
AGSDPLKNEE ELFRRSIVAL S