| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1844 |
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| Symbol | |
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| ID | 2740506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1873287 |
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| End bp | 1874294 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637160731 |
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| Product | DNA integrase |
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| Protein accession | NP_972448 |
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| Protein GI | 42527350 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTACAG AAATTATTGG AGAAAGGAAT AATCATACTG CAACCGATAT TCAGAGTATT
TTAAATAAGT TGGAAGAAGT TATTACTGCC AAACATTACA GTAAGCGTAC AATGGAGGCT
TACAGCTATT GGATAAGCCG CTTTATTCGT GAAAATAAGA ATAAAAATCT TAAAACTCTT
TCCGATACGG AAATAAATGC CTTTGTGAGC CGTCTTGCAG TGAAGGAAAA GGCTGCCGCT
TCAAGCCAAA ATCAGGCTCT TGCGGCTCTT TTGTTTCTAT ATAAAAACAT ATTAGGCTTA
ACTATAAAGA CTCCTGAAAA TATAGTCCGT GCTAAAAAGC CTAAAAAGCT GCCTGCCATA
ATGACCCGTG AGGAAACTGC AAAGATATTC TCTCTTTTGC CTGAAAACGA TTACGGGCTT
CTTATCCGTT TGCTTTACGG AACCGGAATG CGGCTTATGG AAGCCTTGCG GTTAAGGATT
CAGGATATTG ATTTTGGGAA AAACGAAATT ACGGTACACT GCGGAAAGGG TGCGAAAGAC
CGTAAAACCG TACTTCCTGT TTCTCTTAAA TTTCCGCTTC AAAAACATAT GGAAAAAGTC
CGCCTTATAC ATGAGGCAGA CTGCAAGGAA GGTTTCGGTT CGGTGCCGCT TCCGTTTGCT
CTTGCAAAAA AATATCCCAA TGCCAGTAAG GCTTGGGCAT GGCAGTGGGT GTTTCCTCAA
GCACGCCGAT GGCGTAACAA AGAAACCGGC GAGCAAGGGC GCCACCATAT CGATCCTTCG
GTTATTCAGC GTACTCTGCA TGAAGCTGTT TTAAGGTCAG GTATCCCTAA ACCAATCGGC
TGTCACACTT TCCGCCACTC ATTTGCAACG CACCTGCTTG AAGCCGGCTA CGATATCCGC
ACCATCCAAG AGCTTCTCGG CCACAGCGAT GTTAAAACTA CTATGGTTTA CACCCATGTC
CTAAACCGCG GCGGACTAGG CATTCAAAGC CCTATCGACA GGATGTGA
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| Protein sequence | MTTEIIGERN NHTATDIQSI LNKLEEVITA KHYSKRTMEA YSYWISRFIR ENKNKNLKTL
SDTEINAFVS RLAVKEKAAA SSQNQALAAL LFLYKNILGL TIKTPENIVR AKKPKKLPAI
MTREETAKIF SLLPENDYGL LIRLLYGTGM RLMEALRLRI QDIDFGKNEI TVHCGKGAKD
RKTVLPVSLK FPLQKHMEKV RLIHEADCKE GFGSVPLPFA LAKKYPNASK AWAWQWVFPQ
ARRWRNKETG EQGRHHIDPS VIQRTLHEAV LRSGIPKPIG CHTFRHSFAT HLLEAGYDIR
TIQELLGHSD VKTTMVYTHV LNRGGLGIQS PIDRM
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