Gene TDE1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1825 
Symbol 
ID2740487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1857340 
End bp1858434 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content28% 
IMG OID637160712 
Producthypothetical protein 
Protein accessionNP_972429 
Protein GI42527331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAT GTTATTTATG CAAGAATGAA ATTACAGAAC AAAATATAAC AATTGAACAT 
ATTATTTTAA ATTCTATGGG CGGAAGATTA AAATCATCAA ATCTAATCTG TAAAGAGTGT
AACTCAAAAT TTGGTGATTC ATTTGACGCG AAGTTATCAA AGCAATTTGA GTTTTTTGCT
AATATTTTAG ACATAAAAAG AGAACGAGGA AAAGTTCAAG ATGTTATAAT GGTAAGAGAA
TCCACTGGAG AGGAATACAG AGTTACTCCA GATGGCAAAC CTATAGTAAA TAAACCAACA
ATTGAGAGAA AGGAAATAGA GAATGGAGAA GAAATCCATA TTCAAGCAAG GAATCTTGAC
GAATTAAAAA AGATTTTAGT AGGGTTAAAA AAGAAATACC CTGCAATCAA TATTGATGAG
TGTTTAAAAA AAGCTAAACA TATAAAAGAA AGATTATCAG AACCTTTGGG TATTACGTTA
ACACTTGGCG GAAGAGACTC AATGCCTGCC ATACTAAAAA TGGCTATTAA TTTTTTTGTT
GAAATTACAC GTGATGTAGT AACAGTATCT GAAGCAATTG AAGATCTTCG GAAAAATTCG
ACAGACAAAG TTGAGCCAAT AATATTAGAA GAGAGTCTTT TTGATCTAGG AGAGAATGAA
GTTACTCATA GTATATTTTT AAACGCTAGT CCAGAAGAAA AAAAAGTATA TGCAATTATA
GAATTATATG GAACAATTCA ATTTATTGTA AAACTTTCAA AAAATTATAA TGGAAATGCG
TTTATAAAAC TTTATGTTTA TGATGTTTTA TTGACAAAAG AAATTCAGAA AAAAGTAAAT
TACATACCAG ATTTTAATTA TATATTCTCT CATGAATATC CAAAGTCAAA TCCTAATTTT
CAAATTTTAA ATGATAAAAT GAGTCATGTT ATGCAAATCG CTATGAAAAG AAAAAATAAT
TCTTTCATTT CTGAAATTAT AAAAAAATCG TTTGATAATA CTTGGGGAAA ATTACCTGAG
GGAAAAATCA TAACAAATGA AGATGTAGAT ATGTGTCTTG ATGAATTAAT GAAAAATATA
GAGCTTTATT TTTAG
 
Protein sequence
MSTCYLCKNE ITEQNITIEH IILNSMGGRL KSSNLICKEC NSKFGDSFDA KLSKQFEFFA 
NILDIKRERG KVQDVIMVRE STGEEYRVTP DGKPIVNKPT IERKEIENGE EIHIQARNLD
ELKKILVGLK KKYPAINIDE CLKKAKHIKE RLSEPLGITL TLGGRDSMPA ILKMAINFFV
EITRDVVTVS EAIEDLRKNS TDKVEPIILE ESLFDLGENE VTHSIFLNAS PEEKKVYAII
ELYGTIQFIV KLSKNYNGNA FIKLYVYDVL LTKEIQKKVN YIPDFNYIFS HEYPKSNPNF
QILNDKMSHV MQIAMKRKNN SFISEIIKKS FDNTWGKLPE GKIITNEDVD MCLDELMKNI
ELYF