Gene TDE1706 details

Gene Information

• Locus tag: TDE1706
• Symbol: cinA
• ID: 2740878
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1762265
• End bp: 1762843
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637160589
• Product: competence/damage-inducible protein CinA
• Protein accession: NP_972310
• Protein GI: 42527212
• COG category: [R] General function prediction only
• COG ID: [COG1546] Uncharacterized protein (competence- and mitomycin-induced)
• TIGRFAM ID: [TIGR00199] competence/damage-inducible protein CinA C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.174221
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATTGATT TTGAGCTTAT AAAAAAAGTT TTTTTTGTTC TAAGAGAAAG AGGCATTAAG 
CTTATAACCG CCGAATCTTT GACTGGAGGC TTGATAGCTT CCGAATTCAC AAAAATATCG 
GGGGCTTCAG AAGTGCTTTG GGGCGGTTAT ATAGTTTATA CGCCTCAGGC GAAAATCTCG 
CTTTTAAATA TAGAGCCTGA TATAATAGAC TCTTTCGGAG TGGTAAGTCC GCAAACCGTA 
GAAGCTATGG CTTTAGGTGC CGTTAAAAAT TTCTTTAATG CTTCCTGTGC TCCTGAACCT 
GCTGTTTCTA TTGCGGTAAG CGGAGTTGCA GGCCCATCAA GCCTTGAAGG AAATCCTCCC 
GGGACAGTAT GTGTTTCTTC CGCTTTTTTT TGTCCGGCAC CTTCTGATTT AAAAATTTTA 
AAAAAAGATG CTTTTGTTTT TAAAACGCAT ACCTATCGGT TTTCAGGCTC AAGGGATGAG 
GTAAGGGAAC AAACTGTAAA TAAGGCTTTT TTGCATGTGT TATCCTTAAC GGAAAAAACG 
GCAGCCCCGA TTAGAAACTG CCGTGATTTT AAGTGTTGA 

 

Protein sequence

MIDFELIKKV FFVLRERGIK LITAESLTGG LIASEFTKIS GASEVLWGGY IVYTPQAKIS 
LLNIEPDIID SFGVVSPQTV EAMALGAVKN FFNASCAPEP AVSIAVSGVA GPSSLEGNPP 
GTVCVSSAFF CPAPSDLKIL KKDAFVFKTH TYRFSGSRDE VREQTVNKAF LHVLSLTEKT 
AAPIRNCRDF KC