Gene TDE1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1696 
Symbol 
ID2740868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1754110 
End bp1755591 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content42% 
IMG OID637160579 
Producthypothetical protein 
Protein accessionNP_972300 
Protein GI42527202 
COG category[S] Function unknown 
COG ID[COG5476] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAA TTTTAGTAGG ATGTATAAAT CATGAGTCGA ATAGCTTTAA CCCCATTATT 
ACGGGGATTG AAGACTTTGT TATTTTTAGA GGAGAAGATG TTTTAACCGA AGGCTTAAAG
CCCTATTATT CTTCTACGGG AATTATTGAG ACCATTCAAA AATGGGGCTG GGAGGTAGTA
CCTGCCGTAG TTGCAAGGGC TGTGCCGAAC GGCTTGGTTG ATTATAATCT ATACACCGAA
CTTAAAAAAG ATTTTTTAGC TTATATAGAT AAGGCTCTTT TGGATGCCCC GATTGACGGC
ATCTGTCTAG GTCTTCACGG TTCCTTAAAG GTTCAAAACA TAGGGCCTGC AGAAGGCGAC
CTTTTAAAGG CTATCCGTGA AAAACTTCCC CGTATTCCTT TAACGACAGC CCTCGACATG
CATGCTACGG TAACCGACGA GATGATTAGG TATTGTGACG GCATTGTAGG CTATAAAACC
GCCCCCCATA TTGACTGTTA TGAAACGGGA GTTCATGCAG CGGAGCTTTT AAAAAAGGCT
TTGGACGCTT CAAATAAGCT TTGTATAGGA AGGGTAAAAA TCCCAATGCT GGTAGCAGGC
GAAAAAAGCG AAACCGCTGC AGAGCCTATG AAAAGCTTAA TAGCTTCATG CGTTGAGGCT
GAAAAAGAAG AAGGCTTACT TGCAGCATCA GTTCTTTTGG GCTTCCCATG GGCAGACAGC
AAGGATAACG GCGTAACCAT AGTAACAACG GCCTTAAACG ATCAAGGCCT TGCAGATAGG
GCTGCCTTAA AAATAGCTAA AGAATTTTGG GCCGAGCGTC ATAATTTTAA ATTTAAGGTA
GAACATTATG ATTCTTTTAC TTCAATAAAA ACCGCTATAG AATCGGTAAT GCAAAATAAA
GAAGGTCCTG TCTTTGTCTC GGATTCGGGC GATAATCCTA CAGCCGGTTC TACCGGAGAT
TCTACCGAGT GCTTTGAGGC TCTTTTAAAA CAAAAAGAAG CTTTAAAGGA TCTTCCCACC
AAGGTGCTCT ATTCGGGATT TTTCGATAAG GTTGCCGTTG AAAAATGCTT TGAGGCAGGG
GAGGGTGCTT CCCTGGAAAT AACTATAGGC GGAACATGGG ATAAAATTAA CGGCAAAAAA
ATTCCTTGCG CTGTAAGGGT CTTAAAACTT GTAGAAAACT ATGGCGTTTA TAATTCCCGT
TTAGCCCTTG TCGAAATGGG AGAGACAATA ATAGTTTTAA CCTCAAATCA CATAGGCTTC
GGGGATGAAG AGCTTTTGCC TGCCCTAGAT GTAAATGCAG AGGATTATTG TATAGTTATC
GTAAAGCTGG GCTATTTGGA ACCCTGTTTT CAAAAAATAG CAAAGAGGGC AATATTGGCG
GAATCTAAGG GCTGTTCAAA CGAGGTTTTG GAAACATTGG ATTATCCTCA AACTCCGCGC
CCCATATATC CATTGGATAA GGATATGGAT ATAAAATTAT AA
 
Protein sequence
MKRILVGCIN HESNSFNPII TGIEDFVIFR GEDVLTEGLK PYYSSTGIIE TIQKWGWEVV 
PAVVARAVPN GLVDYNLYTE LKKDFLAYID KALLDAPIDG ICLGLHGSLK VQNIGPAEGD
LLKAIREKLP RIPLTTALDM HATVTDEMIR YCDGIVGYKT APHIDCYETG VHAAELLKKA
LDASNKLCIG RVKIPMLVAG EKSETAAEPM KSLIASCVEA EKEEGLLAAS VLLGFPWADS
KDNGVTIVTT ALNDQGLADR AALKIAKEFW AERHNFKFKV EHYDSFTSIK TAIESVMQNK
EGPVFVSDSG DNPTAGSTGD STECFEALLK QKEALKDLPT KVLYSGFFDK VAVEKCFEAG
EGASLEITIG GTWDKINGKK IPCAVRVLKL VENYGVYNSR LALVEMGETI IVLTSNHIGF
GDEELLPALD VNAEDYCIVI VKLGYLEPCF QKIAKRAILA ESKGCSNEVL ETLDYPQTPR
PIYPLDKDMD IKL