| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1576 |
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| Symbol | miaB |
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| ID | 2739773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1622918 |
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| End bp | 1624273 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637160458 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | NP_972182 |
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| Protein GI | 42527084 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.415733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATACT TTTTTGAAAC ATACGGCTGT CAGATGAATC AGGCTGAATC CTCATCAATG
GAACAGATTC TGCTAGAAAA GGGGTGGACG AATTCTTCCG ATGCCGAACA CTGCGATTTA
CTTATAATAA ATACTTGTTC CGTACGCATA ACTGCCGAAA ACAGGGTTCT GGGAAGACTG
GGACATTTTT CGGGTTTGAA AAAAAAGCGT AAATTTTTTG TGCTTTTAAT AGGTTGCATG
GCTGAAAGGC TTTATACCGA AATACAAAAA GAATTCCCGC TCATCGATTA TGTTGTCGGA
ATGTTTGAAC GCAATCTTCT TCCTCAAATT TTTGATGAAA TTAAAGCCCG CCTTAAAAAT
GATAATTATA TGGCGGAGTT TACTCATGAC AATATCGAAG AAAAACCCGT ATCGGGTTAT
TATTTCGCAC CTCTTTCTCA TTCGCCGAAG TCCTTTCAAA GCTATGTGCC CATTATGAAC
GGCTGCAATA ATTTTTGTAC TTATTGTATT GTGCCCTATG TTCGGGGCAG GGAAGTTTCG
CGTCCCGTAA ATGAAATATT GCAGGAAATT ACCGAGCTTT CATCAAGGGG GGTAAGGGAA
ATTACCTTGC TCGGCCAAAA CGTAAATTCC TATAAAGGAG AAGACGGGGA GGGGAGGCTA
ATCGATTTTC CAAAACTTTT AACTCTTATA GCGAGAGAAG CGGATAAAAC CGATATGATA
AGATGGATAC GCTTTATGTC GAGTCATCCT AAGGATATGT CCGATGCTTT AATCGACACA
ATCGCTGCCG AAAAAAGACT TTGCAAACTC GTTCATCTTC CGGTTCAACA CGGCTCCGAT
ACAATTTTAA AAAGAATGAA CAGGGTTTAC ACGATTGAAC ATTATAAGAA CAGAATAAAA
CGCCTAAAAG AAACCATACC GGATATAGCC TTGAGTACCG ATATTCTGAT GGGCTTCCCC
GGAGAAACCG AAGATGATGT AAAGGCTACA TTGGATTTGA TGCAGGAAAT AGAATTCGAT
TCGGCCTTTA TGTATCATTA TAATCCGCGT GAAGGAACAA AGGCTTTCAA TTATCCTGAC
AGGATTCCTG AAGAAGTAAA AATAGAAAGA TTGGGCCGTG TAATCGACTT ACAGCTAAAA
ATTACGGCAA AAAAAATGAA GGCAAAACTC GGTAAAAAGG TAGATATCTT GGTTGAATCC
CATTCAAGAA ATGAAAGGTC TGAACTTTTC GGGCACACCG AACAAGGAGA GATGACCGTA
ATCCAAGGCA ATCCTCCCGA ATCCTTAATC GGAAATTTTG CCCATGCAGA ATTAAAAGAA
CTAAAAGGAA AAACATTTAG AGCAAATCTT AATTAG
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| Protein sequence | MTYFFETYGC QMNQAESSSM EQILLEKGWT NSSDAEHCDL LIINTCSVRI TAENRVLGRL
GHFSGLKKKR KFFVLLIGCM AERLYTEIQK EFPLIDYVVG MFERNLLPQI FDEIKARLKN
DNYMAEFTHD NIEEKPVSGY YFAPLSHSPK SFQSYVPIMN GCNNFCTYCI VPYVRGREVS
RPVNEILQEI TELSSRGVRE ITLLGQNVNS YKGEDGEGRL IDFPKLLTLI AREADKTDMI
RWIRFMSSHP KDMSDALIDT IAAEKRLCKL VHLPVQHGSD TILKRMNRVY TIEHYKNRIK
RLKETIPDIA LSTDILMGFP GETEDDVKAT LDLMQEIEFD SAFMYHYNPR EGTKAFNYPD
RIPEEVKIER LGRVIDLQLK ITAKKMKAKL GKKVDILVES HSRNERSELF GHTEQGEMTV
IQGNPPESLI GNFAHAELKE LKGKTFRANL N
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