Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1517 |
Symbol | |
ID | 2739723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1563956 |
End bp | 1564405 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637160397 |
Product | hypothetical protein |
Protein accession | NP_972123 |
Protein GI | 42527025 |
COG category | [S] Function unknown |
COG ID | [COG4939] Major membrane immunogen, membrane-anchored lipoprotein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000399796 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATT ATAAAATTAT TTTGACTGCA CTGTGTTTTA TCTGTATTTT TTCTTGTTCA AAAACGGAAA CAAAGAAGAG TATAAAATAC AAAGACGGCG TCTATAAGTC TTTTGCCAAT ATTAAAGATG ATTGGGGCGG AACAGCCGAG GTTGAAATAA AAATTGAAGA AGGTAAGATT GTTGAGTGTA CGTTTTTGTC TTACGAAAAA AACGGCAATC TAAAAGGGCC TGAATACGGA AAGGTTGACG GAGTTATAAA AAATATGGGC CTTTATAAAA TTGCTCAAGC CTCTGTTTTA AAAGCTGCGG AGTACGGTCA AAAATTAATT GAAACTCAAA ATATTGATGA TGTCGATGTA ATTGCCGGAG CTTCAATTTC TTATAAACTG TTTAAAGATG CGGTTGAAAA TGCATTGCAG GGTGCAATGC AAAATGCAAA AGAAAATTAA
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Protein sequence | MKNYKIILTA LCFICIFSCS KTETKKSIKY KDGVYKSFAN IKDDWGGTAE VEIKIEEGKI VECTFLSYEK NGNLKGPEYG KVDGVIKNMG LYKIAQASVL KAAEYGQKLI ETQNIDDVDV IAGASISYKL FKDAVENALQ GAMQNAKEN
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