Gene TDE1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1517 
Symbol 
ID2739723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1563956 
End bp1564405 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content33% 
IMG OID637160397 
Producthypothetical protein 
Protein accessionNP_972123 
Protein GI42527025 
COG category[S] Function unknown 
COG ID[COG4939] Major membrane immunogen, membrane-anchored lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000399796 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT ATAAAATTAT TTTGACTGCA CTGTGTTTTA TCTGTATTTT TTCTTGTTCA 
AAAACGGAAA CAAAGAAGAG TATAAAATAC AAAGACGGCG TCTATAAGTC TTTTGCCAAT
ATTAAAGATG ATTGGGGCGG AACAGCCGAG GTTGAAATAA AAATTGAAGA AGGTAAGATT
GTTGAGTGTA CGTTTTTGTC TTACGAAAAA AACGGCAATC TAAAAGGGCC TGAATACGGA
AAGGTTGACG GAGTTATAAA AAATATGGGC CTTTATAAAA TTGCTCAAGC CTCTGTTTTA
AAAGCTGCGG AGTACGGTCA AAAATTAATT GAAACTCAAA ATATTGATGA TGTCGATGTA
ATTGCCGGAG CTTCAATTTC TTATAAACTG TTTAAAGATG CGGTTGAAAA TGCATTGCAG
GGTGCAATGC AAAATGCAAA AGAAAATTAA
 
Protein sequence
MKNYKIILTA LCFICIFSCS KTETKKSIKY KDGVYKSFAN IKDDWGGTAE VEIKIEEGKI 
VECTFLSYEK NGNLKGPEYG KVDGVIKNMG LYKIAQASVL KAAEYGQKLI ETQNIDDVDV
IAGASISYKL FKDAVENALQ GAMQNAKEN