Gene TDE1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1420 
Symbol 
ID2739697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1464515 
End bp1465714 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content32% 
IMG OID637160299 
Producthypothetical protein 
Protein accessionNP_972026 
Protein GI42526928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.977518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTT CTCCCTCACC GATAATTATA GGAACGTCAA GTTTTGCACA ATCAGGAGGT 
TCCGCTATTA CAAATATTTT GGAAGAATTT TTTTGTTTTT CGGTTCTTAA GGGCGGAGCG 
GAATTTGAAT GTAAATTCTT TACGGAAAAT ATATTTGCTT TAGAGACCGC TTTGAAAATC 
GGTAACGGTA TAGATAAGGC TGCAAAAGTT TTTTTATATA ATGCATATCA AGCTTCACGA 
GATAGTGATT ATAAAAATAA TTTCGGTCCC GAATTTTTAA ACTATACAAT CGAATATATC 
GATTCCGTTA CGGAAAATTA TCTAGGTGCC GTTCATAAAG ATTATGATTA TACCTTTCTT 
GATCCGGCTG AACATGCTAT ATTCTCAAAA GCACAAAGAC TTTATAATTA TAAATACGGT 
AAACGCATCT ATGAAGCCTA TGAACCATAT CAGTGGAAAC CTTCATATAT TCCATTCGGA 
AAAGTGTATT ACGGTAATTT TCCCAATGAT TTTTATGATA AAACGCATGA GTACATCGAA 
AAAGTATTTG CACCGCTTTA TGAAAAAAAC AAAAGGTATG TACTTGCAGA TGCCCTATAT 
AGTGCGAGTA TAAGCACGCC GCAAGAATTA ATGTACTATA AAAATTCAAA GGCCCTAATC 
GCCAATAGGG ATCCTCGCGA CTTATATGTA ATGAATAAAG AAATATACGG TGAATGGTAT 
ATGCCGACTT GGAATGTCGA TCGCTGGATA GAATATTATC GGTATAAAAG ACAATGTATA 
AAACCGCAAA AAGAAAATAA TGCCGGAAAT ATTTTGCATC TTCAATTTGA AAGTTTAATT 
TATAATTATG AAGGAAGTTT AGCAAAAATT AAAAAATTTT TAGACTTAAA AGATTCGGAA 
CATATAAAAA AAGGGCAGAT CTTTATTCCG GAAAAATCAA AAACAAATAC GCAGTTGTTT 
AGAAAATATC CGAAATATGC AAAAGATATT GAAAAAATAG AGAAGAAATT GCCTGAATTT 
TGTTATCCTT ACTCCGAAAC ACAAATACGT CATTTTCTTC CTGAGGAAAT AAAAGGTGAG 
AATAGAGAAA CACTGGAAGA TATACGCAAA ACCGTTTGTA TTTTTCAAAA AACGGGAAAG 
CTGCCGTTTT CAAATAAACA AGGCGCTTTT TTGTTCTCAA AATTAGGAGA ACTAATATAA
 
Protein sequence
MNFSPSPIII GTSSFAQSGG SAITNILEEF FCFSVLKGGA EFECKFFTEN IFALETALKI 
GNGIDKAAKV FLYNAYQASR DSDYKNNFGP EFLNYTIEYI DSVTENYLGA VHKDYDYTFL 
DPAEHAIFSK AQRLYNYKYG KRIYEAYEPY QWKPSYIPFG KVYYGNFPND FYDKTHEYIE 
KVFAPLYEKN KRYVLADALY SASISTPQEL MYYKNSKALI ANRDPRDLYV MNKEIYGEWY 
MPTWNVDRWI EYYRYKRQCI KPQKENNAGN ILHLQFESLI YNYEGSLAKI KKFLDLKDSE 
HIKKGQIFIP EKSKTNTQLF RKYPKYAKDI EKIEKKLPEF CYPYSETQIR HFLPEEIKGE 
NRETLEDIRK TVCIFQKTGK LPFSNKQGAF LFSKLGELI