Gene TDE1400 details

Gene Information

• Locus tag: TDE1400
• Symbol: nadE
• ID: 2741267
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1440542
• End bp: 1442494
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637160279
• Product: NAD synthetase
• Protein accession: NP_972006
• Protein GI: 42526908
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0171] NAD synthase
• TIGRFAM ID: [TIGR00552] NAD+ synthetase

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAAAA AAAAGGACTC TAACTTTTGT ATTGAAGAAC TCGGCTTTTA CCGTATTGCG 
GTTTCATCGC CTAAAATTTC TCTTGCAGAC ATAGAAGAAA ATGTGAATAT TCATCTTCAA 
GAGATAAAAA AAGCCGAAAA AGATGGTGCA AACCTTATTC TTTTTCCTCG GCTTTCAATT 
ACGGGGGCTT CCTTAGGTTC CGTTTTTAAA CAGTCTCTTT TAATCGAAAA AGCCCTTGAC 
GCGGTAAAGA TATTAGCCGA AAAAACTAAG CAGTTTTCTA TTGTGTCTGT TATCGGTCTT 
CCTTTTTTAT ATAGGCAAAA TCTTTATACT TGTTCGGCCG TAATCGAAAA CGGAAAACTT 
ATAGCTCTTG TTCCGCATCT TCCTTACGGA TTTTTAAGTT CCTATTTTTG CGATTTTGAA 
GATGCTCCGT GCCTGATTCC GCTTTGCGGA GAAAATATTC CCTTTGGAAA GGAATTTAAA 
TTTATTGTAA GCTATAAGGA TTCTTGCGGT TTTAACACAG GCTTTTCATT TTCATTTGAT 
TCTTCTTCTT GTGCCGATCT TATTTTAAAT CCTCTTGCAG AGCCTTCAAA GCCTCTTGGT 
TCTTCTGCTA TGCGGCAAGG GTATAAGGCT CTTTCAGCCG CAAAAAAATC GGCCATTGCT 
TTTGCAAACT GCGGAATGGG GGAGTCGGTT TCGGATTATG TTTTTGCAGG CGAATGCGGT 
ATTTTTGAAA ACGGAAAAGA ACTTGAGTTT ACATCATTTG CAAAAGTTTC TTACATAGCT 
TCCGACATTG ATACGGAATT TTTAAATATA CAAAAATTAA GCTCAAGGCT TTCGAAAACT 
TCTGATTCCG ATTGGGAAAT TGTAATCGAA AAAGAACGCT CCAATACCAA GAAGACCTTA 
AACTATCATG TACAAAAAAA TCCTTTTTTA CCTGATTGCG ATGAACTTCA TAAAAAGTTT 
ATCTATAAGA ATTTCTTTTC GGAGCTTATT TTCTTTCAAA GCTCTGCCCT TGCAAGGCGG 
CTTCAGTTTA TAGGCTGTTC AAAATGCCTT GTAGGTATTT CCGGAGGCTT GGATTCTTCT 
TTGGCCCTCC TTGCAAGTGC CTATGCCCTT AAACTTTTAA ATATTGATTT AAAAAATCTT 
TATGCCGTTA CCATGCCGGG TTTCGGCACG ACCGAAAAAA CAAAGAACAA TGCTTCGGCT 
CTTGCAAAGA CCTTGGGCTG TACGCTTTTG GAAATCCCTA TTGAAAAGGC TATGATGCAG 
CACTTTTCCG ACATAGGTCA GGATATCGAT AATCATGATA TTGCTTATGA AAATGCCCAA 
GCCCGTGAAA GAACTCAAAT TTTGATGGAT AAGGCAAACC AAATCGGCGG TATAATGGTG 
GGCTCGGGAG ACCTCTCTGA GTCGGCCTTG GGATGGATGA CCTACGGAGG GGATCAGATG 
TCGATGTACG AGGTCAACTC TTCAATTCCA AAGACTCTTC TAAAAGATTG TATACTTGCC 
TTTGCCGAAA ATAAGATTTT TTTTGAAGAT GAAAAGAAAA ACAACGCATT TTTTGAGCTT 
CTATCAAATA TAATAAATAC GCCTGTAAGT CCGGAACTTC TTCCGCCTGA AAATGGAGAA 
ATTTCTCAAA AAACCGAGGA TATAATAGGG CCATATGAAC TTCATGATTT TTTTATTTAT 
CATGCAATAG GAAACGGTTT TTCGCCTAAA AAGGTTTATT TTCTTGCTTG TGAAGCCTTT 
AAGAATTCCT CTTATTCCAA GGACGATATT TTAAAATGGC TGAATCTTTT TTATAAAAGA 
TTTTTCTCCC AGCAGTTTAA AAGATCATGC AGTCCCGAAG GAGCTTCGGT TACCGGTTTT 
TCGCTTTCTC CCCGAGGTGA ATGGCTTATG CCGTCCGAAA TATCTGCAAA AATATGGCTG 
ACAGAGCTTG AATTTTTGCT TAAAATAATG TAA 

 

Protein sequence

MDKKKDSNFC IEELGFYRIA VSSPKISLAD IEENVNIHLQ EIKKAEKDGA NLILFPRLSI 
TGASLGSVFK QSLLIEKALD AVKILAEKTK QFSIVSVIGL PFLYRQNLYT CSAVIENGKL 
IALVPHLPYG FLSSYFCDFE DAPCLIPLCG ENIPFGKEFK FIVSYKDSCG FNTGFSFSFD 
SSSCADLILN PLAEPSKPLG SSAMRQGYKA LSAAKKSAIA FANCGMGESV SDYVFAGECG 
IFENGKELEF TSFAKVSYIA SDIDTEFLNI QKLSSRLSKT SDSDWEIVIE KERSNTKKTL 
NYHVQKNPFL PDCDELHKKF IYKNFFSELI FFQSSALARR LQFIGCSKCL VGISGGLDSS 
LALLASAYAL KLLNIDLKNL YAVTMPGFGT TEKTKNNASA LAKTLGCTLL EIPIEKAMMQ 
HFSDIGQDID NHDIAYENAQ ARERTQILMD KANQIGGIMV GSGDLSESAL GWMTYGGDQM 
SMYEVNSSIP KTLLKDCILA FAENKIFFED EKKNNAFFEL LSNIINTPVS PELLPPENGE 
ISQKTEDIIG PYELHDFFIY HAIGNGFSPK KVYFLACEAF KNSSYSKDDI LKWLNLFYKR 
FFSQQFKRSC SPEGASVTGF SLSPRGEWLM PSEISAKIWL TELEFLLKIM