| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1388 |
|---|
| Symbol | |
|---|
| ID | 2741255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 1427896 |
|---|
| End bp | 1428372 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637160267 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_971994 |
|---|
| Protein GI | 42526896 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1963] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAAAA TGCAGTGGAT TATGTTTTTT TCTAATCCGA TTTTTTTGTC CGCTATAACA
AGCTGGATGA TGAGTCAGAT TATAAAGACT ATTTTTGCAT TATTTAATGC CTCAATAAAG
ACCCCTATAG ATTTTTTTGA GCTGGTGTTT TGGCGTACCG GCGGAATGCC TTCAAGTCAC
TCCGCTCTTG TAGCATCTTT AACCGTCAGC ATAGGTATAA GGCAGGGGTT TGATTCGGAT
CTTTTTATTT TTGCCTGTTT TATGGCACTT ATAGTTATAA GGGATGCTGT AGGCGTAAGA
AGGTCCAGCG GTTTGCAGGC TAAGGCTCTA AATGACCTCG GTGCAAAGTT TGCCGAAAAG
AATGAAGGGT ATCATTTTAG AGCAGTAAGG GAAATCCAAG GACACAAGCC CGTTGAAGCT
GTTGCCGGCA TTATTCTTGG TATAATCACA TCAATATTAT TTGCTTATTT TGGATAA
|
|---|
| Protein sequence | MYKMQWIMFF SNPIFLSAIT SWMMSQIIKT IFALFNASIK TPIDFFELVF WRTGGMPSSH
SALVASLTVS IGIRQGFDSD LFIFACFMAL IVIRDAVGVR RSSGLQAKAL NDLGAKFAEK
NEGYHFRAVR EIQGHKPVEA VAGIILGIIT SILFAYFG
|
|---|
| |