Gene TDE1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1356 
Symbol 
ID2739457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1395764 
End bp1396759 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content39% 
IMG OID637160235 
Productputative lipoprotein 
Protein accessionNP_971962 
Protein GI42526864 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACA AAATTATATT AGTTTTGGCA GCTGTCTGCC TATTTTTCGG TTGTACCAAA 
AACGAAACAC AAAAGCCGGT TACCATGGTA TTTTTACCGA ATGAATCAAG CGATGCTATG 
AAGGATGCGC GGCAAGCTTT TATGGAAATA ATAAGCGAAG CTGTAGGCCG TCCCGTCGAA 
ATCAAAACGA CAACTGATTA TAACATAGCC TTAGAAGCAA TTATATCCGG AAATGCAGAC 
ATGGCTTATA TCGGAGCCGA GGGTTATATA AATGCCCATA AAAGAAATCC GGCCATTGTA 
CCGGTAGTAA CGAATTCGGG ACCCAGCGGC ACATTGGAAG ATGCACTATA CTACAGCTTT 
ATAGCAGTAA GAACGGAAGA TGCAGCTCAA TATAAAGATG AAGACGGCTA TGACTTAAAC 
CGCTTAAAAG GAAAAAACAT TTCATTTGTT TCTACAAGCT CTACATCGGG CTTTGTAATT 
CCTGCGACTC TGTTCGTAAA AAAATTCGGA TTAACAGGTA CCGATGAACT TATTCAGGGA 
AATTCCGTTT TTTCTAAGGT GCTATTTGCA GGTTCCCATC AAGGCTCTCA GGTTAATCTA 
TTTAGAAAGG ATGCAGAAGC CGCAGCCTTT GCAATTCCTC AAACAATAGG CGTCTATGAT 
CTAATCGAAG GAGAAGCCTA TCAGACAGGA GCCGCTTACA AGGTTGTAGA AGGAGCTATA 
GAACCATTTG ACAAATTTCC CGGAAGCGAA ATTACCATAA TCCAATCGAT TCCTGTTTTA 
AACGCTCCAA TAGTCATGAA TACAAAGACC CTGTCCCCTG AAGAACAGAA CAAAATACAG 
GAAGCCCTTA CCTCAGAAAA AACGGCAAAT AATCCCGGTA TTTTTAAAAT AAAAGACTCC 
TACAAAAAAG GAATGTATCC AAAATACACG GAAAAAACAA AACTTGTTAA AACCACAGAT 
GCTTGGTATG ATAAAATCAG AAATTTAACA AAATAA
 
Protein sequence
MKHKIILVLA AVCLFFGCTK NETQKPVTMV FLPNESSDAM KDARQAFMEI ISEAVGRPVE 
IKTTTDYNIA LEAIISGNAD MAYIGAEGYI NAHKRNPAIV PVVTNSGPSG TLEDALYYSF 
IAVRTEDAAQ YKDEDGYDLN RLKGKNISFV STSSTSGFVI PATLFVKKFG LTGTDELIQG 
NSVFSKVLFA GSHQGSQVNL FRKDAEAAAF AIPQTIGVYD LIEGEAYQTG AAYKVVEGAI 
EPFDKFPGSE ITIIQSIPVL NAPIVMNTKT LSPEEQNKIQ EALTSEKTAN NPGIFKIKDS 
YKKGMYPKYT EKTKLVKTTD AWYDKIRNLT K