Gene TDE1351 details

Gene Information

• Locus tag: TDE1351
• Symbol: mreD
• ID: 2739452
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1391335
• End bp: 1391853
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 637160229
• Product: rod shape-determining protein MreD
• Protein accession: NP_971957
• Protein GI: 42526859
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2891] Cell shape-determining protein
• TIGRFAM ID: [TIGR03426] rod shape-determining protein MreD

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAAAAG TTATTTTGTG GACTTCTTTA AGCGTTTTCT TTATAACCTT ACTTCAAACG 
GCTATTTTTT CTCACATATC TTTTTTTACG GTGCTGCCCG ATTTGGTTTT GCTTACCGTT 
ATTTATATTG CAATTTCAAA CGGTTCTCTT ACAGGTTTGA TTTGCGGTTT TATTGCAGGC 
CTTTTAGCCG ATTTTTTGTC GGCAGCTCCC ATAGGCTTAC ATTCCTTTAT TTTTACTTTA 
ACAGGTTACC TTGTAGGAAA ATTTTACGGT ATTTATAATT TAAACAAGGT AATTTTCCCT 
TGTATTTTAG GCGGTTTAGG CTTTGTATTT AAGGTATTGC TTTTGTTTGT TTTAAAAATA 
CTTTTTGGGC AAAATATTCA TACCTATAAT ATTTTTTCGA TAAACTTTGC CATAGAGGCT 
GCGGTAAATA TTTTTTTTAC TCCCTTTGTA TTTTTATTTT TTAATCTTTT TCCTCAAGCC 
TTTATATCGA GGAGTATAGT ACAATATGAA AAATACTGA 

 

Protein sequence

MKKVILWTSL SVFFITLLQT AIFSHISFFT VLPDLVLLTV IYIAISNGSL TGLICGFIAG 
LLADFLSAAP IGLHSFIFTL TGYLVGKFYG IYNLNKVIFP CILGGLGFVF KVLLLFVLKI 
LFGQNIHTYN IFSINFAIEA AVNIFFTPFV FLFFNLFPQA FISRSIVQYE KY