Gene TDE1298 details

Gene Information

• Locus tag: TDE1298
• ID: 2741052
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1334872
• End bp: 1335405
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637160175
• Product: cyclic nucleotide binding domain-containing protein
• Protein accession: NP_971904
• Protein GI: 42526806
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000825589
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAGG TAGAAATGGA TAGAGACATT TTTTTTCAAG AAGTAAAACA AACAGCTTTT 
TTTTCGTGCA TGGAAGATGC GGATTTAATG CAGATAATAG ATTTTTCTGA AATTCTTTCC 
TATGAACGAG GAGAAAGCAT TATTACCGAA GGTACCGAAA ACAACGGCTT TTTTGTATTA 
TTGAGCGGAA AACTTGAAAT AGTAAAAAGC GGAAAATGGG GAGATGTGAA AATAGGTATT 
TTACAAAACA ATGCAAGTTT CGGTGAAACA TCTCTCTTTA AAGATCAGCC TGCAACGGCC 
ACAGTAAATG CCTTAGATCC TTCGACAATC CTGCTTATAT CTAAAGAACA ATTTACGGCA 
TATATAAATG CTCATCCAAA GGCAGGAAAC GTTATCTTAA CATATATAGT TTTTAGCCTA 
TTGCAAAAAC TCAATACTAC AAATAAAGAA AGGGTACAGG AAAAGAACCT TGAATTCTCT 
CCGGAAGATT TAGCTTTTAT GGTTGATATG TTTACCCCTC CAACAGAGGC TTAA 

 

Protein sequence

MNKVEMDRDI FFQEVKQTAF FSCMEDADLM QIIDFSEILS YERGESIITE GTENNGFFVL 
LSGKLEIVKS GKWGDVKIGI LQNNASFGET SLFKDQPATA TVNALDPSTI LLISKEQFTA 
YINAHPKAGN VILTYIVFSL LQKLNTTNKE RVQEKNLEFS PEDLAFMVDM FTPPTEA