| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1293 |
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| Symbol | |
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| ID | 2741047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1330711 |
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| End bp | 1332093 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637160171 |
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| Product | TldD/PmbA family protein |
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| Protein accession | NP_971900 |
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| Protein GI | 42526802 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00519979 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTG ATGATTTAAA GAGCCATGCA AGGCTTTTTT CGGAGTACAC AGAGCTTAGG
GTTCAAAATG ACAGCTTTAT GACTGTGGCA GCTGTAAACG GAGACCTTAT AAACAATGTT
CAAGCCCGAA AAGCCGGAGT TTGTGCCCGC TCTTTTAAGG ACGGGGTATG GGGCTTTGCC
TCATCACCCG AACAAACGGA TGAGGCCATA GCCTCATCTA TAAAATCGGC AAACGAAAAC
GTTAAGTTTT TAGCCAAAAA AACGGGAAGC GGTCAAGCAG AACTTCCAGC CTTTACGGGA
CAGGGCACCT ACGGAAAGTA CGATCCTTCC AAGGATGCCG ATCAAAAGGA AGCAATAGAC
TTTATAAAAG ACCTTGAAAA CTACACGGCA AAAAAATATC CCGAACTTCA ATCAAGAATT
TTTAGAATCT CGGCAAACGG AACCGAAAGG CATCTTATTA CATCGGACAA GGCTGATGCC
CACACCTATA TTTCAAGAGC AAATTTAGTG ATGAGCTTTA AGCTCCTCTC GGAAGGCCAG
CCCATAGACC TCTACGATGT ATTCGGAGGC TACGGTCAAT TTAAAAACCT CTTCGATAAG
CCTAATCTTT ACTATTCTAA AATAGATGAA ATGGTTGAAA ACCTAAAACA AAAGGCGGCC
GGAGTCTATG CCAAGCCCGG TATTCACGAT GTTGTACTCG GCCCCGACCT TGCAGGCATC
CTTGCCCATG AAGCAATAGG ACATACCACA GAATCGGACT TCGTAATGTC CGGCTCCATT
GCGGCAGACT TTATGAATAA GGAAGTTGCG ACTCCATTGG TAACTCTCGT AGACTTTGCC
TACGAGTGTA ACGGCAAAAT ATGCCCCGTT CCTATCTGGA TAGACGATGA GGGAGTTGCT
GCAAAGGATG CCGTTATAAT AAAGGACGGA ATCTTACGAT CCTATATGCA TAACAAACAG
TCGGCAGCCA TCTTTAAGGT AGACCCGACA GGAAACGCCC GTGCAAACGA ATTTTCGGAT
GAGCCTTTGG TGCGTATGCG GAACACCGCA ATTCTCCCCG GAAAGGATAA GCTAAAGGAC
ATGATAGCGA GCATTGATGA CGGCTACTAT TTTGTACGCT CATCGAACGG GCAGGCCGAC
TCTACAAGCG AATTTATGTT CGGTGTAGTG CTCGGTTATG AAATTAAAAA CGGAAAAATC
GGCAGGGCCG TAAAGGACTG CACTATAGCG GGAGTAGCCT TCGACATGCT TAAAACCGTA
ACAATGGTAA GCGACGATAT GAGTTGGAGC AATGCCGGCA TGTGCGGAAA AAAGCAGCTC
ATCAATGTAG GAATGGGCGG ACCTGCAATC AAGTGTAAAA TCGGAGTAGG AGGACGGGAA
TAA
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| Protein sequence | MKFDDLKSHA RLFSEYTELR VQNDSFMTVA AVNGDLINNV QARKAGVCAR SFKDGVWGFA
SSPEQTDEAI ASSIKSANEN VKFLAKKTGS GQAELPAFTG QGTYGKYDPS KDADQKEAID
FIKDLENYTA KKYPELQSRI FRISANGTER HLITSDKADA HTYISRANLV MSFKLLSEGQ
PIDLYDVFGG YGQFKNLFDK PNLYYSKIDE MVENLKQKAA GVYAKPGIHD VVLGPDLAGI
LAHEAIGHTT ESDFVMSGSI AADFMNKEVA TPLVTLVDFA YECNGKICPV PIWIDDEGVA
AKDAVIIKDG ILRSYMHNKQ SAAIFKVDPT GNARANEFSD EPLVRMRNTA ILPGKDKLKD
MIASIDDGYY FVRSSNGQAD STSEFMFGVV LGYEIKNGKI GRAVKDCTIA GVAFDMLKTV
TMVSDDMSWS NAGMCGKKQL INVGMGGPAI KCKIGVGGRE
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