| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1292 |
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| Symbol | |
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| ID | 2741046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1329404 |
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| End bp | 1330711 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637160170 |
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| Product | TldD/PmbA family protein |
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| Protein accession | NP_971899 |
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| Protein GI | 42526801 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00918646 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGAT TTGACGGAAT AAAACATGCG GAATTTATCT TGGATGCCCT TAAAAAAGAG
GGAGCCGATA AGGCAACAAC AAGGGTTTCA AAAAGCGTAA AAAGCGAAAT GAATATTGAT
GCAGGCCGTT TAAGCCTTTA TAGGAGTACC ACCGATATCT CAGTTGCAAT GACCTCTCTT
GTAGAAACCA AGAAGGGGCA TATTTCGGGA AATGATTTAA GCGAAAAAAC CTTAAAAGAA
GAGGCTGCAA AAGTTGTTGC CCTTTCACGA TCTTCCGAAA AGGATGATGG AAACGATATT
GCGCCTATGC AAAAGGGAGA AACTCTTTCC TACGGCGATA CGGAACCCAA TAACGAAAAA
ATGTATGAGA GGCTGAAAGA ATTTTTGGAT TATACAAAAT CGGCCTACCC TACCTTACAA
TTAAATCAAT GTGTTTTAGA CTTTACAAGA AGCGAGCAAA TCCTTGCAAA CTCAAACGGA
GTGCGCTTTA CACAAAGCTC AGGCATATAC AATTTTACGG CAATGTTTTT TGCAAAAGAC
GACAAGGGTA CGAGCAGCTT TAACTATAGC GGAGCCGCTC ACCTTAACTT GGATAAGCCC
TTAAAGGACT GGGGAAACCT CGATGAGATA ATGAGGGAAA ACTGCGGTCA AACGGTTACC
GCCCCTCTTT CAGGTTCCTT TAAAGGGGAT ATAGTCATAA CTCCTATGAG TATGATAGAT
TTTGCAGGTA CGATGATAGG GCTTTTTATG AGCAACATGC CCCTAATTAC AGGCACTTCT
ATTTGGAAGG ATAAATTAAA TCAAAAAGTA CTATCGGATT TATTTACCCT CCATTCGTTT
CCTCGAAGAC CGGCGGGCAC TGAACTTGAA AGCCTTTACA CCGGAGACGG CTTTAAAACC
GAAAACAAAA CACTTATTGA AAAGGGCGTT TTAAAAGACT TTGTTTTGAG CCTTTACGGT
TCCAAAAAAA CAGGCCTTCC CCGCTGCGTT TCGGGAGGAG AAGGCTTAAT AATAGAAAGC
GGAAATACGG CAAAGGCTGA TATGATTAAG AATGTCAAAA AAGGAATTTT ACTCGGCCGT
TTTTCAGGCG GAAACCCTGC CGCAAACGGA GACTTTTCGG GCGTTGCAAA AAATTCCTAC
CTCATCGAAA ACGGCGAAAT TACAAAACCT CTTTCCGAAA CGATGATAGC AGGAAACATC
GTAAAGATGT TCAGCGATAT AATTTCCGTT TCAAAAGAAA AAGTCGACTA CGGAAACGCA
ATAGTTCCGT GGATGCATTC TACAGGCATT ACAATTTCGG GAAAGTAA
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| Protein sequence | MSGFDGIKHA EFILDALKKE GADKATTRVS KSVKSEMNID AGRLSLYRST TDISVAMTSL
VETKKGHISG NDLSEKTLKE EAAKVVALSR SSEKDDGNDI APMQKGETLS YGDTEPNNEK
MYERLKEFLD YTKSAYPTLQ LNQCVLDFTR SEQILANSNG VRFTQSSGIY NFTAMFFAKD
DKGTSSFNYS GAAHLNLDKP LKDWGNLDEI MRENCGQTVT APLSGSFKGD IVITPMSMID
FAGTMIGLFM SNMPLITGTS IWKDKLNQKV LSDLFTLHSF PRRPAGTELE SLYTGDGFKT
ENKTLIEKGV LKDFVLSLYG SKKTGLPRCV SGGEGLIIES GNTAKADMIK NVKKGILLGR
FSGGNPAANG DFSGVAKNSY LIENGEITKP LSETMIAGNI VKMFSDIISV SKEKVDYGNA
IVPWMHSTGI TISGK
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