Gene TDE1206 details

Gene Information

• Locus tag: TDE1206
• ID: 2740100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1238650
• End bp: 1239372
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637160084
• Product: TPR domain-containing protein
• Protein accession: NP_971813
• Protein GI: 42526715

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.417505
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA GATTTTGTTT TGTAATAATT ACTTTGTTGT TAATTTTTAT ATTGGGAAGC 
TGTAACAAGG TTACAAGTAT TCGAAGACTT CAAGAATTGG AAGAAGGAGT CAGTAATCCT 
AATACGGAGG CCGAATTAAA AGATGCTATA AGAAAATATG AAAAAAGAGT TGACGATATA 
ATGATTGCAG AAGAAAGGAT AGGTATTTGG TATAAAATAC TCGGCTCAAG GTATATGGAT 
CAAAAAATGT ATAAAAAAGC ATTAAAAGCT TTTCAATCTG CATTGGAGTA TTATCCGGAG 
AATCAAAATT TATTTTATCA GGCCGGTCTT GCTGCAAGTT TAACGGCAAA AAATTCTTTA 
GATTTTGAAT TGACCGGAAC CGACATCGAG AAAAAAAGAT ATTTTGATCT TGCCGTTTCC 
GCTTATAAGC GTGCTCTTGA AATAGATCCT AAACATGCAA AGGCTGTTTA TGCTCTATCG 
GTATTGTACA TATTCGAATT AAATCGTCCT ACCGAAGCAA TTCCCATTTT AGAAAAAATT 
ACCGAATGGG AAAAGAAACC TATAGATCAT TTATTTTTAC TTGGGGCTGC TTATTATATG 
ACAGGTGAAA ATGAAAAAGC TATTGCCGTT TATGAGCGCA TTATCGAAAT TTCAAGCAGC 
GCAGAAAAAA AAGCAAAAGC GGAAAGCAAT ATTAGGGAGA TTAGGAGTTC GGGAGGAAGA 
TAG 

 

Protein sequence

MKKRFCFVII TLLLIFILGS CNKVTSIRRL QELEEGVSNP NTEAELKDAI RKYEKRVDDI 
MIAEERIGIW YKILGSRYMD QKMYKKALKA FQSALEYYPE NQNLFYQAGL AASLTAKNSL 
DFELTGTDIE KKRYFDLAVS AYKRALEIDP KHAKAVYALS VLYIFELNRP TEAIPILEKI 
TEWEKKPIDH LFLLGAAYYM TGENEKAIAV YERIIEISSS AEKKAKAESN IREIRSSGGR