| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1176 |
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| Symbol | |
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| ID | 2740073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1205372 |
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| End bp | 1206640 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637160051 |
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| Product | oxygen-independent coproporphyrinogen III oxidase, putative |
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| Protein accession | NP_971784 |
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| Protein GI | 42526686 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.238058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGCAG AAGATATTTT AAATTGTTCA TTTAAAGACC GCAAAAAATC TCATCACGAT
ACAGGAATGG GTTCCATGAA ATATTCAAAA GGAATGAGGT CTTTGGAAAA AGCCCTTTCA
GAACCCAATA CACAAAACGG GAAAAAATCC ATTTACATCC ACGTACCCTA TTGTAAAAAA
ATTTGCAATT TTTGCAGCAT GAGGCGGACA ATAAACCCGG TACCGGATGA CTACGCCGCC
CTTGTGATAA GGCAGATTGA AAATTACGGT AAGACGGAAT ATGTAAAAAC CTCAAACATA
AATTCGGTTT ATTTCGGAGG CGGAACACCT ACAACCCTGC CTGCAAAACA GCTTGCCGAA
ATACTTAAAG CTCTTCAAAA AAATTTTAAC ATAGCAAAAG ATGCCGAAAT TTCGATGGAG
ACTACCGTTT CTGAATTGGA TGACGAAAAG CTTAAAATTC TTTTTGAAAA CGGTTTAAAC
AGAATAAGTG CCGGTATTCA AACCTTTAAT GATGAAGGAC GAAAAACATT GGGCAGAATC
GGAAACGGCG AAAATGCGGA AAATTTTTTG AGACGAGCTT TTAAAACCGG CTTTAAAAAT
GTCAACATCG ATATTATTTA TAATTATCCC GGTGAAACAA AGGAAATATT AAAGGATGAC
TTACATAAGG CCTTTGCCTT AGATATTGCA GGTTTTTCTT TTTACTCTCT CATCGTAATG
GATACTTCCA AGATAGGCCG CAGTGTCGAT AAAGAAGAAT ATGCCGAAAA AACGCTTCAT
CAGGATGCAG AGTTCTTTTT GACCATTTTG GAAGAAAGCC GAAAAGCAGG TTACGATTTT
TTAGAGATAA CAAAACTTGT AAAACCCGGC AGAGACAACT ACGAATATAT CAGAAGCGGG
CACCTAGGCG GCGATATTTT TCCTGTGGGG GCCGGAGCCG GAGGCTTCGT AAATAATACG
GCCGTAATGA ATCCCCTCGA CAAAGAAAAA TTTGCGGATC AAATTAACGG CTTTGATAAA
ACTTCGGGTA TGTGGATAAG CGAAGATTAT CGCAGAATAA AAAGATTTTC AGGACAGCTT
CAAGAAGGAT TGTTGGATTT AAGTTTTTTG ACAAAAGAAG AGTCGGATAA AATCTATGAT
ATGCTTACCG GATTGGAAAA AGAGACTTTG ATCAAAAAAG ATGAAGGCTC CAAAAATTAT
AAATTTACCG ACAAGGGCTT TTTTTGGGGC AACAGTCTTG CAGCCGAACT TGGAAAAAGC
ATTTTTTAA
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| Protein sequence | MTAEDILNCS FKDRKKSHHD TGMGSMKYSK GMRSLEKALS EPNTQNGKKS IYIHVPYCKK
ICNFCSMRRT INPVPDDYAA LVIRQIENYG KTEYVKTSNI NSVYFGGGTP TTLPAKQLAE
ILKALQKNFN IAKDAEISME TTVSELDDEK LKILFENGLN RISAGIQTFN DEGRKTLGRI
GNGENAENFL RRAFKTGFKN VNIDIIYNYP GETKEILKDD LHKAFALDIA GFSFYSLIVM
DTSKIGRSVD KEEYAEKTLH QDAEFFLTIL EESRKAGYDF LEITKLVKPG RDNYEYIRSG
HLGGDIFPVG AGAGGFVNNT AVMNPLDKEK FADQINGFDK TSGMWISEDY RRIKRFSGQL
QEGLLDLSFL TKEESDKIYD MLTGLEKETL IKKDEGSKNY KFTDKGFFWG NSLAAELGKS
IF
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