10 homologs were found in PanDaTox collection
for query gene TDE1153 on replicon NC_002967
Organism: Treponema denticola ATCC 35405



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002967  TDE1153  hypothetical protein  100 
 
 
198 aa  409  1e-113  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0687  hypothetical protein  43.33 
 
 
256 aa  152  4e-36  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3682  hypothetical protein  40.24 
 
 
282 aa  122  4e-27  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009428  Rsph17025_1724  hypothetical protein  37.76 
 
 
214 aa  87.8  1e-16  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.450247  normal 
 
 
-
 
NC_008463  PA14_58970  hypothetical protein  33.92 
 
 
235 aa  86.7  2e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.00000000160858  normal  0.0216719 
 
 
-
 
NC_010002  Daci_4702  hypothetical protein  34.56 
 
 
279 aa  77  0.0000000000002  Delftia acidovorans SPH-1  Bacteria  normal  0.427469  normal 
 
 
-
 
NC_009656  PSPA7_4442  hypothetical protein  40.19 
 
 
210 aa  72.8  0.000000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3967  hypothetical protein  40.54 
 
 
185 aa  63.5  0.000000002  Pseudomonas putida W619  Bacteria  normal  0.0782123  normal 
 
 
-
 
NC_004578  PSPTO_3946  hypothetical protein  38.89 
 
 
155 aa  53.9  0.000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0442328  n/a   
 
 
-
 
NC_013165  Shel_15820  hypothetical protein  30.19 
 
 
331 aa  48.1  0.00008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0630612  hitchhiker  0.0000678597 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>