Gene TDE1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1126 
Symbol 
ID2739542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1157685 
End bp1158425 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content39% 
IMG OID637160000 
ProductTPR domain-containing protein 
Protein accessionNP_971734 
Protein GI42526636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGC ATTTTTATCG ATTAAAATTC AAAAAAAGCA TTTTTTTTGC TGTTTTTTTA 
TCTTTTTTTT CATTGCTTTT TGCCGTAGAT TATTTTGAAG AAGGTAAAAA ACTTTTGTAT 
GCTGATAAGC CTCAAGAGGC CGTTTCGGCT CTTTTTAAGG CTAGTCAGGA AGCCGGAACC 
CCTAAATCGG TTTATCTTTA TCTTGGCGTT GCTTATTTTA GGATGGGGAA GTACAGCGAG 
GCCTTAACCT ATCTTTCTCA AGGCAAGGAT AAGGATATAC TCAACGGGCA TTTGTATTAC 
TACAATATAG GTAATGTATA TTTTTTACAA AATCAGTTTG AAGCCTCCGA GTTGGCTTAT 
AATGAGGCTA TTTCTTCAAA CGGCCTCTAT GCTCCGGCTT TTTTAAACAG GGCTAATACA 
CGGATAAAAC TGGAAAAACT TGAGGGTGCT TTACAAGATT ATAAAATTTA TTTAAACTTA 
AACCCTGAGA CGCTTCAAAG ATCTTCAATC GAAAAAATGA TATCGCTTTT GGAAGGCCTT 
GCCGAAGAAG CGGAAAGAGC GAAGGCCTTG GCTGAAGCCA AAAAGGCAGC CGAAGAGGCC 
GAGCGTTTGG CTGCTGAGGC GAGGTATAAA AAACTTATGG AAGATGTAAA CGCCAACCTT 
TCTTCGGTTG ACAATGCAGA TGCCTTATCG GCCGGAGCCG ACAATACAAT AGATTATTCG 
GAGGAAAACG AACTTGACTG A
 
Protein sequence
MKTHFYRLKF KKSIFFAVFL SFFSLLFAVD YFEEGKKLLY ADKPQEAVSA LFKASQEAGT 
PKSVYLYLGV AYFRMGKYSE ALTYLSQGKD KDILNGHLYY YNIGNVYFLQ NQFEASELAY 
NEAISSNGLY APAFLNRANT RIKLEKLEGA LQDYKIYLNL NPETLQRSSI EKMISLLEGL 
AEEAERAKAL AEAKKAAEEA ERLAAEARYK KLMEDVNANL SSVDNADALS AGADNTIDYS 
EENELD