| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1073 |
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| Symbol | |
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| ID | 2740834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1103655 |
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| End bp | 1104695 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637159947 |
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| Product | oligopeptide/dipeptide ABC transporter, permease protein |
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| Protein accession | NP_971681 |
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| Protein GI | 42526583 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACAAGT GGTATGCACT TAAACGTATT TTACGCGGTG TAGTAATATA TTCCATTCTT
ATTTTTATCT TTTCTTTTTT ATTTAATCAG ATAAATGAAA AGGTTCAGCG CAGCCAGATA
ATGGAAATGG TACGTGCTGA AGCAAAGGGT CTAAAAAATA TGACTGCCGA ACAGATAATG
GCATGGCGTA AAGATCAAGA ATTGACCCTT ATCAGACAAT ATAAATTAGA CAGGCCCTTA
GTTGAACGTG TTTTACACAA CGCAAAGAGG GTTTTGACTT TTGATTTCGG TAAATCGACA
ACGATAAAAT CCTTAACGGG TTCTCAAGAG GTTATCAAAA TACTTGGTGA AGCAATTCCC
AGAACCCTCT TGCTTTTTAC AACAGCCTTT GTGATTAATA CGCTGATTGG TTTAGCCCTG
GGTTTAAAAA AAGCCCAAAA GCCGGGAAGC CGGTTGGATA AGACAACAAG TTTGATTACT
CTTATCATTT ACGGTATGCC CAGTTGGTGG TTAGCCATGC TTTTAATATT TGTGTTTGTT
TATAAAATTC CCCTGTTTCC TTCGGGAGGA GTAAACTCTG TCCCTGTACC GGAAGGTATA
TGGTTTGTAT TTGATAGACT GCAGCATCTT GCTCTTCCGA TTCTTACCTT GGTATTTTTG
GGCTTTTGGA GTACGGCTTA CGTTATCCGA AACCTTGTTT TGGGTACCTT GCAGGAAGAT
TTTATAATGA GTGCAAGGGC TCGCGGTATC CCCGAAAAGA AGGTACTTCA CGGCCATACC
TTAAGGACAT CGGCACCCCC ATTGGTAACT ATGATTTTGC TGTCATTTTT GGCTTCAATG
TCGGGAAGTA TCATATATGA GGGTATTTTT TCGTGGCCCG GTTTAGGTCA GCTTTATTGG
ATTGCCGTTC AGCAAAACGA TATACCTGTC TTAATGGGAG ATTTGGCTAT TACAACAGGT
CTTTATCAAG CAGGTCTTAT AATCCTTGAT CTGGTTTACG GTTTCTTAGA CCCGCGTATA
AAAGTCGGAG GCAAGGAATA A
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| Protein sequence | MYKWYALKRI LRGVVIYSIL IFIFSFLFNQ INEKVQRSQI MEMVRAEAKG LKNMTAEQIM
AWRKDQELTL IRQYKLDRPL VERVLHNAKR VLTFDFGKST TIKSLTGSQE VIKILGEAIP
RTLLLFTTAF VINTLIGLAL GLKKAQKPGS RLDKTTSLIT LIIYGMPSWW LAMLLIFVFV
YKIPLFPSGG VNSVPVPEGI WFVFDRLQHL ALPILTLVFL GFWSTAYVIR NLVLGTLQED
FIMSARARGI PEKKVLHGHT LRTSAPPLVT MILLSFLASM SGSIIYEGIF SWPGLGQLYW
IAVQQNDIPV LMGDLAITTG LYQAGLIILD LVYGFLDPRI KVGGKE
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