Gene TDE1067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1067 
Symbol 
ID2740828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1094634 
End bp1095791 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content42% 
IMG OID637159941 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein 
Protein accessionNP_971675 
Protein GI42526577 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGA TATTATTGGA AACTCGAGGC CTTAAACAGT ATTTTCCTAC CGGCAAAACA 
CGGAATGAGA GAAAAACTCT TAAAAGAATA GCCGATGAAG CTCTTAAGGT TTGTGCCGGC 
ATGTTTAATA CTAAGGTAGG CATGAGTCAG CTGATGGACA TGTATAAAAG CGGTAAGGAC 
CTCGGCAAGG AGCTGACAGA TCTAATTTTG GACTATGAAA CCTATTCCGA CCTGCACGGT 
CAAAACTTGT GCGTAATCGC CAATGACGGT ATAGACCTCG TTATCCATGA AGGAGAAACC 
GTAGGCCTTG TAGGAGAATC GGGCTGCGGA AAATCAACCT TGGGCCGTAC AATCCTAAAA 
CTTTACAAGC CCACAGCAGG CGAAATCTTT TTTGAGGGCG AAAACATTAC AAATTACACT 
GTAACTCAAA TGATGCCCTT ACGAAAAAAG ATGCAGATTA TCTTCCAAGA CCCCTACTCC 
TCTCTTAATC CTAAGATGAC TGTAGGACAG ATCATAGGCG AGGCCTTGCT TGAGCATGGA 
ATGTTCAAAA AGAAAGACCC CGCATATGAA AAATATGTAA AGGAGATAAT GAACACCTGC 
GGCTTGGCGG ACTATATGAT TTACAGATAT CCTCATGAAT TTTCAGGCGG TCAAAGGCAG 
CGCATAGGTA TAGCACGGGC CCTTGCATTA AAGCCTAAAT TCATAGTATG CGATGAAGCC 
GTTTCGGCCT TGGACGTATC GATTCAGTCC CAGATCATAA ACCTCCTCAA TGACCTGCAA 
AAAGAATTTA ACCTGTCCTA TTTGTTTATT TCTCATGACC TTTCGGTTGT AAAGCACATA 
AGCGATAGAA TCGGTGTTAT GTATTTGGGA AATATGGTCG AATTTACCGA TAAACGCGAA 
ATGTATGCCA ATCCTCTTCA TCCTTATACA AAAGTCCTTC TTTCAGCCAT TCCTGAAACG 
GACTTACAGA AGATGAGAAC AAAGAGGCGA ATCTTATTGG AAGGAGACAT TCCGTCCAAT 
ATCATCACGC CTACAGGCTG TAAATTCCAT ACAAGATGCC CCATTGCAAA GGATATATGC 
AAACGCGAAA TTCCTCAATT TAAGGAAGAA AAACCGGGAC ATTTTGTTGC CTGCCACTTT 
AGCGGAGCGG AGCTGTAA
 
Protein sequence
MSKILLETRG LKQYFPTGKT RNERKTLKRI ADEALKVCAG MFNTKVGMSQ LMDMYKSGKD 
LGKELTDLIL DYETYSDLHG QNLCVIANDG IDLVIHEGET VGLVGESGCG KSTLGRTILK 
LYKPTAGEIF FEGENITNYT VTQMMPLRKK MQIIFQDPYS SLNPKMTVGQ IIGEALLEHG 
MFKKKDPAYE KYVKEIMNTC GLADYMIYRY PHEFSGGQRQ RIGIARALAL KPKFIVCDEA 
VSALDVSIQS QIINLLNDLQ KEFNLSYLFI SHDLSVVKHI SDRIGVMYLG NMVEFTDKRE 
MYANPLHPYT KVLLSAIPET DLQKMRTKRR ILLEGDIPSN IITPTGCKFH TRCPIAKDIC 
KREIPQFKEE KPGHFVACHF SGAEL