| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1055 |
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| Symbol | |
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| ID | 2740816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1083072 |
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| End bp | 1084421 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637159928 |
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| Product | MATE efflux family protein |
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| Protein accession | NP_971663 |
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| Protein GI | 42526565 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000467502 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAAAA AAGACTTGGA TCTTACCGAA GGCGTAATTT GGAAAACTTT GATAATATTT
ACTCTTCCCA TTTTGGCAGG AAACTTTTTT CAGCATTTAT ATACGGCAGC CGATGCCGTC
ATTGTGGGGA AGTTTACAGG TAAGGAAGGT CTTGCGGCAA TCGATTCCGT TTTAAGTTTA
TTAAAACTGC CGATAAATCT TTTCAGCGGA CTTTCGGCGG GGGCTACGAT TATTATTTCC
CAATTATTCG GTGCAAAAAA AATCAAGGAA CTCTTTACTG CAATCCACAC TTCAATAGGC
CTAACCCTTA TTGCGGGCAT AAGTCTTTCG ATAATCGGAG TTCTTATTTC TCCACTGCTT
CTTTTTATGA TGGGCGTTCC TCAAGATATT TTTGAGATGA CATTGAGCTA TGTCAGAATT
TATTTTGCGG GAATGGGAAT CTCCCTTTTT TATAATATCG GTTCGGGAAT TTTGCGTGCA
ATGGGAAATT CCAAAACGCC CTTCTATGCC CTGATAGTTT CTTCAATATT AAACGTAATC
TTAGACCTAA TCTTTATAGG AATCTTTAAG TGGGGAATCG GAGGAGCAGC CCTTGCGACC
GTGCTTTCGC AGCTTATAAG TGCAGTAATA ATTCTTTTTG CTCTCACCAA AAAAACGGGA
TACTGTCCAT TGCTCCTTAG CAAGATAAAA ATTGACAGGT TATCTTCTAT CAAGATTGCA
AGGCTCGGAC TTCCTATCGG CATACAGTCA GCCTTCTTCC CCATAGCCAA TATGATAATT
CAGGCAACTG TAAACGGTAC GGGAACGGAC AACATTGCGG CGTGTGCGCT TTGCGGCAAG
CTGGACTTTT TAATTTGGAT ATTACTCGAA GCCATGACCA CATCGGTTGC AACCTTTGTT
GCTCAAAATT ACGGTGCAAG AAAATATGAC CGCATTACCG GAGTTGTGCG GATAGGGCTT
ATTATGTCCG GCATTATAAT AGGAAGCATT TGTGTAATGC TTTATTTTTG GAATGTCCCC
TTGGGAAAAC TTTTTATCAA CTCAAAGGAT TACGAGGTTC TTATAATAAG CGAAAAACTT
ATGCATATCC TTGCGCCCTT TTATACGGTC TTCATCTTTA CCGAAGTTTT TTCGGCGGCC
ATCCATGCAA CGGGAGAAAC TTTTAAGCCC ATGCTTATAA CCCTCCTCGG AGTTTGTGCC
TCCCGCATTG TCTGGATATT TTTATTTGTT CCGATAAACC CTGTAATCGA AATGATTGTT
CTAGCCTTCC CTATTTCATG GACTTTGACA AGCATTATAT TTACGGTCTA TTATTTTATC
TACAGAAAAA AATTATATCA AGTTCGATAA
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| Protein sequence | MYKKDLDLTE GVIWKTLIIF TLPILAGNFF QHLYTAADAV IVGKFTGKEG LAAIDSVLSL
LKLPINLFSG LSAGATIIIS QLFGAKKIKE LFTAIHTSIG LTLIAGISLS IIGVLISPLL
LFMMGVPQDI FEMTLSYVRI YFAGMGISLF YNIGSGILRA MGNSKTPFYA LIVSSILNVI
LDLIFIGIFK WGIGGAALAT VLSQLISAVI ILFALTKKTG YCPLLLSKIK IDRLSSIKIA
RLGLPIGIQS AFFPIANMII QATVNGTGTD NIAACALCGK LDFLIWILLE AMTTSVATFV
AQNYGARKYD RITGVVRIGL IMSGIIIGSI CVMLYFWNVP LGKLFINSKD YEVLIISEKL
MHILAPFYTV FIFTEVFSAA IHATGETFKP MLITLLGVCA SRIVWIFLFV PINPVIEMIV
LAFPISWTLT SIIFTVYYFI YRKKLYQVR
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