Gene TDE1023 details

Gene Information

• Locus tag: TDE1023
• Symbol: mamA
• ID: 2741502
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1055263
• End bp: 1055682
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637159896
• Product: methylaspartate mutase subunit S
• Protein accession: NP_971631
• Protein GI: 42526533
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding)
• TIGRFAM ID: [TIGR00640] methylmalonyl-CoA mutase C-terminal domain; [TIGR01501] methylaspartate mutase, S subunit

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0266173
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGAA AAATTAAACT TGTATTGGGC GTAATAGGCT CTGATTGTCA TGCTGTCGGT 
AATAAAATTT TGGATTACTC TTTAACCGAA GCCGGTTTTG AAGTAACCAA TATAGGCGTT 
TTGAGTCCCC AAGAAGATTT TATAAATGCT GCCCTTGAAA CGAATGCGGA TGCGATTTTA 
GTATCCTCTC TTTACGGTCA AGGAGAGCTG GACTGTAAAG GTTTACGCGA AAAATGCGAT 
GAAGCAGGCT TAAAAGGGAT TAAGCTTTTT GTCGGCGGAA ACATAGTTGT AGGAAAACAA 
AATTTTGATG AGGTACATAA ACGTTTTACC GCAATGGGTT TTGATCACGT TTATCCGCCG 
GGAACACCGG TTGAAACGAC TATTAAAGAT TTACATGCCG ACTTTCCGGA TCATGCATAG 

 

Protein sequence

MARKIKLVLG VIGSDCHAVG NKILDYSLTE AGFEVTNIGV LSPQEDFINA ALETNADAIL 
VSSLYGQGEL DCKGLREKCD EAGLKGIKLF VGGNIVVGKQ NFDEVHKRFT AMGFDHVYPP 
GTPVETTIKD LHADFPDHA