Gene TDE1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1002 
Symbol 
ID2739079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1028535 
End bp1029227 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content36% 
IMG OID637159876 
Producthypothetical protein 
Protein accessionNP_971611 
Protein GI42526513 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA GAAAATTAAC CGATAAATGG CGGAAAATCA TTACTATAGG CTTAATAATT 
TTTCTTTTGT GTTTGAGCAT CTTTCTCTAT TTTTTTTGGG GACAACCTCT TATAAAATTT 
CTTATGGATG CAGAAAAAGT ACATGCCTAT GTTGAATCTC ATCCTTTTTC GAGCCGTATA 
TTTTTTGTGA CTGCCGTTTT TTTACAAGTA GTAGTTGCGG TAATCCCGGG ATGTCCATTC 
GAAATAGGAG CAGGCTATGC TTTTGGAGCG GTAGAGGGCG CCTTAGTATC ATTGGCAGGA 
ATATCTGCCG CCGGTATTTT AATTTTTTTA TTTGTAAAAA AATTCGGCAA AGCGGCAATA 
GAAATTTTCT TCTCGCCCGA AAAAATAGAA TCCATAAAAA TATTTAAAAA TAAAAAAAGA 
CTCCACCTAA TAGTTTTTAT AGTTTTTTTA ATTCCGGGAA CACCTAAAGA CTTATTAACC 
TATATGGCAG GCCTTACACC TATACGTTTA AGCGAATGGC TCATACTAAG CACATTGGCC 
CGTTTTCCGG CTATATTGGC GTCAACAATA GCAGGAACAA GCTTAGCACA AAAAAATACG 
GGGCTTGCTC TTGCCGTGTT TTTGATAGGA AGCATCGCTG CCTTTGCAGG AGTTTTGATT 
TTTAACAAAC TAAATAGCCG TAAAAAAAGC TAA
 
Protein sequence
MKKRKLTDKW RKIITIGLII FLLCLSIFLY FFWGQPLIKF LMDAEKVHAY VESHPFSSRI 
FFVTAVFLQV VVAVIPGCPF EIGAGYAFGA VEGALVSLAG ISAAGILIFL FVKKFGKAAI 
EIFFSPEKIE SIKIFKNKKR LHLIVFIVFL IPGTPKDLLT YMAGLTPIRL SEWLILSTLA 
RFPAILASTI AGTSLAQKNT GLALAVFLIG SIAAFAGVLI FNKLNSRKKS