Gene TDE0834 details

Gene Information

• Locus tag: TDE0834
• Symbol: nqrE
• ID: 2739518
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 854381
• End bp: 854953
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637159707
• Product: Na(+)-translocating NADH-quinone reductase, E subunit
• Protein accession: NP_971444
• Protein GI: 42526346
• COG category: [C] Energy production and conversion
• COG ID: [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA
• TIGRFAM ID: [TIGR01943] electron transport complex, RnfABCDGE type, A subunit

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00737828
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGAAA CACTTAGTAT TTTTCTTTCT GCAATCCTTG TAAAAAACGT AGTTTTAATG 
CGCTTTTTAG CCCTTTGCCC CTTTATAGGA ATGTCCTCCG ACGTAAAAAA ATCGGTAGGC 
ATGGGCTGGG CCGTACTCTT CGTTACTCTT TTGGCCACAG CCGTAACCTA TCCCATATAC 
AATTACGTAT TGATAGGAAA CCTCGAATTC CTTCAGACCC TTATCTTTAT CTTGGTAATT 
GCAAGCTTGG TTCAGCTGGT AGAATTCTAT CTAAAAAAAG CGGCTCCTGC CCTTTACAGC 
TCGATGGGGG TTTATTTGGC CCTGATTACG ACAAACTGTG CAATCCTTGC AGTTACAATC 
GATGCCATTG ATGAAGGCTA TACCTTTGTA CAAGCCCTTG TTCATGCTGC AGGTTCAGCT 
TTCGGCTTTA TGATTTCGCT CTTGCTTTTG GCAGGCTTAA GACAAAGAAT AGATAATGCC 
CCTGTTCCGA AATTCTTAAA AGGAACGCCC ATTCTCTTTA TTGCTGCAGC CCTTCTATCC 
ATGGCATTTG AAGGTTTCAA AGGACTGATT TAA 

 

Protein sequence

MPETLSIFLS AILVKNVVLM RFLALCPFIG MSSDVKKSVG MGWAVLFVTL LATAVTYPIY 
NYVLIGNLEF LQTLIFILVI ASLVQLVEFY LKKAAPALYS SMGVYLALIT TNCAILAVTI 
DAIDEGYTFV QALVHAAGSA FGFMISLLLL AGLRQRIDNA PVPKFLKGTP ILFIAAALLS 
MAFEGFKGLI