| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0773 |
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| Symbol | rpsC |
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| ID | 2740313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 809583 |
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| End bp | 810302 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637159646 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | NP_971383 |
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| Protein GI | 42526285 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.127701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGACAGA AAGTAAACCC TACAGGATTA AGACTTGGTA TAAACAAAAC TTGGTCGTCT
CGCTGGTATG CAGGCCCCCG AAATTATGCC GACTTGTTGC TTGAGGATTT AAAGATTCGA
GCTATGATTC AGGAAATTCC TGAATGTAAA AATGCCGACA TTGCAGAAGT TGAAATCATC
CGTCATCCCC AGAGGATTAC GATTATGATT CACACGGCTC GTCCCGGCGT TATAATCGGT
GTAAAAGGTG CCAATATCGA AAATATCGGA GCCATTATAC AGAAAAAGCT TGGCAAAAAA
GTGCAAATCA AGATTAAGGA AGTAAAGAGA GCCGAATTGA GGGCTGCTTT AGTTGCTCAA
AACGTTGCAC GCCAGCTTGC CGGAAGAGCT TCTTTCCGAA AGGTATTAAA ACAGGCTTGT
TTTAATACGA TGAGGTCCGG TGCTCAAGGT ATAAAGATTA GAATTTCAGG ACGCTTAGGC
GGTGCTGAAA TGTCGCGAAC CGAAGAAATG AAGGAAGGAC GCGTTCCTCT TCACACACTT
CGGGCAGATA TAGACTACGG TTTTGCTGAA GCGGATACAA CCTATGGAAA GATAGGTGTT
AAGGTATGGC TTTACAGCGG AATGATGTTT GGCGGAGAAC AAAAAGAAGA TGCAGGTGCC
TTGCTCAAAA AGCAAAGAAG ACCCCGCACT GAAAAGCCCG CTCAAGCAGG GAGGCAATAA
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| Protein sequence | MGQKVNPTGL RLGINKTWSS RWYAGPRNYA DLLLEDLKIR AMIQEIPECK NADIAEVEII
RHPQRITIMI HTARPGVIIG VKGANIENIG AIIQKKLGKK VQIKIKEVKR AELRAALVAQ
NVARQLAGRA SFRKVLKQAC FNTMRSGAQG IKIRISGRLG GAEMSRTEEM KEGRVPLHTL
RADIDYGFAE ADTTYGKIGV KVWLYSGMMF GGEQKEDAGA LLKKQRRPRT EKPAQAGRQ
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