Gene TDE0668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0668 
SymbolsufD 
ID2739661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp705899 
End bp707026 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content39% 
IMG OID637159544 
ProductFeS assembly protein SufD 
Protein accessionNP_971281 
Protein GI42526183 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACA GAACTTATTT TAAACGGCTT GACTACACAA AAACGGATAT CCCTTCAAAG 
CCTTTTTGCA ATTTAAACTG TAAGGCCAGC GGCCGGGCTG AAGCTAAAAA TATAGAACAA 
ATGACGATTG AGCAATTTTT AAAAACAGCC CCTTCAAAAG ATATAGAAAA ATTCTTTGAT 
TTTACGAAGA CAAAACGCGA AAAAAATTGC GGCCTCGGAG ACAATTATGT TCAAGAAGTA 
AAGGATAAAA GAAATTCCGG TATTTACTTA AAAGTAAAAA AGTGCGCGGA TAATGAACAG 
GCTGCGAATG TTCTAATCAA TTTTACAATG GATCAGGCCA ATAATGTTCT TTATGACCAA 
AATCTTATTG TAATTGAAGA AGGGGCAAGG GCTAAGATCT TTTTTTATCA TGATGTAAAG 
GCCTACGATT GCTCAAAGGC CGATATTTTT AGAAACGGCC TACTAAGCAT TGTTGCCGAA 
AAAAACTCTC AAGTAGAATT TATAAAGGTA CAAAACTTGA GTCATTGCGG CATTAACTTT 
GAAACCGTAA AAATCTTTGC TATGGAGAAG GCTCAAGTTA CCCTTTACGA TATTCAGCTT 
GGGGCAAAGA TAAACGGAGC TTCAACTTCT ACCTATATGC CTGAGGAATG GGCCGAGGTT 
CAAATATACC CCCTCTACTT TGCAGATAAG ACCAGACGCA TCGACTTGGA GCAAAATTTT 
ATCATCAACG GGAAAAATTC TCTCGGTGCA ATTACCGCAA AGGGAGCCTT AAAGAACAAG 
GCTCATAAGA TGTTCCGGGG CAATATCTTT TTAAACAGAG GCTGCTCAAA GTCCATTGCA 
AGGTTTTCGG ACAATACGAT TATGCTCGAT AAGACCACTG TGGGTGCTAC AATTCCAACA 
ATCTTTTGCG ATGAGGATGA CGTTATAGGA GAGCACGCTG CGAGCTTTGA GGCGGTAAAC 
AAGGACAAGC TTTACTATCT TATGACCCGC GGTTTTGACG AGCTTAGTGC CAAAAAGCTT 
ATAATCGAGG CTGCCTTTAA ACCTGTTTTT AACCGCATTG ATGATGAAAC GATAAGAGAA 
AAGCTCCTAG AGGAGTTCAG GATAAGCTTA GATGAGATAA AGGAATAA
 
Protein sequence
MSDRTYFKRL DYTKTDIPSK PFCNLNCKAS GRAEAKNIEQ MTIEQFLKTA PSKDIEKFFD 
FTKTKREKNC GLGDNYVQEV KDKRNSGIYL KVKKCADNEQ AANVLINFTM DQANNVLYDQ 
NLIVIEEGAR AKIFFYHDVK AYDCSKADIF RNGLLSIVAE KNSQVEFIKV QNLSHCGINF 
ETVKIFAMEK AQVTLYDIQL GAKINGASTS TYMPEEWAEV QIYPLYFADK TRRIDLEQNF 
IINGKNSLGA ITAKGALKNK AHKMFRGNIF LNRGCSKSIA RFSDNTIMLD KTTVGATIPT 
IFCDEDDVIG EHAASFEAVN KDKLYYLMTR GFDELSAKKL IIEAAFKPVF NRIDDETIRE 
KLLEEFRISL DEIKE