Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0653 |
Symbol | |
ID | 2739201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 689063 |
End bp | 689734 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637159529 |
Product | hypothetical protein |
Protein accession | NP_971266 |
Protein GI | 42526168 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000750609 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGACG AATTATATGA AAAAACTTTT ACAAAACCTA TAATAAGGTA TGGAAGGTTT ACAAACCTAT TATCCTTGGT TCTTTGCTTT CTGCCTTCAA TTCTTGTTTG GGTCGTTTAT GGAGTAAAGC CGTCAACACA GGATATATTG ACAGGTTGGG GCTTGGCAGC ATCCGTATAT GCAATCTATG CCGTTGTTGA ACCTATCAGT TATTTCCCCA TACTCGGCTT ACCCGGAACT TATATGTCTT TTCTTTCCGG TAATATCGGA AATGTACGCT TGCCTACTTC GGCCGTTACG CAAGAAGCTG TCAGCGTAGA ACCCGGTACA AAGAAAGCCG AAATAGTTTC TACCCTCGGT ATTGCAGGGT CGATAGTTAC CAATCTTATA ATTGTAACTA TTGCCGCTGT AGGAGGAGCG GCTTTAATGA ACATCTTCCC CAAAAAAGTA TTGGAAGCCT TTGCCTATGT TTCGCCTGCA ATCTTCGGTG CTATGTTTGG AATGTTTGCC GTTAAAAATA TAAAATACGG CATATTTGCT TTTATTTTAG CTATGGCCTT ATTAAATCTT GTTAAAATAC CGGTATATGT AATGATTCCG GCTTGTGTAT TCGGAACGGT AGCTTTCGGT TTTTTAACTT ACAAAAAACC TAAGACTGAA GAACAAGCTT AA
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Protein sequence | MSDELYEKTF TKPIIRYGRF TNLLSLVLCF LPSILVWVVY GVKPSTQDIL TGWGLAASVY AIYAVVEPIS YFPILGLPGT YMSFLSGNIG NVRLPTSAVT QEAVSVEPGT KKAEIVSTLG IAGSIVTNLI IVTIAAVGGA ALMNIFPKKV LEAFAYVSPA IFGAMFGMFA VKNIKYGIFA FILAMALLNL VKIPVYVMIP ACVFGTVAFG FLTYKKPKTE EQA
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