| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0639 |
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| Symbol | |
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| ID | 2739364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 673543 |
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| End bp | 674484 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637159515 |
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| Product | oligopeptide/dipeptide ABC transporter, permease protein |
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| Protein accession | NP_971253 |
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| Protein GI | 42526155 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAACT TTATTTTAAA GAGAATTTTA TACGGTATTC TTACAATGTT CATAGTTGCA
AGTATTACCT TTTTTTTAGT GCATATTATT CCGGGAAATC CCATTGAAAC CATAGCAGAA
AATTTACCTG AAGAAAGACG GAACGAGCTT TATTCTCAAT ACGGATACGA CAAATCTCTT
TTTACTCAAT ATATGGTTTT TTGGAAAAAT CTTTTGATGA AGGGTGATTT GGGAACCTCG
CTTTATTACC GAGGAAGGCT TGTTACCGAT GTAATAAAAA CCCACGCACC TATTTCGGCA
AGACTGGGTC TCCAAGCATT ATTTTTCGGC GTTTCAGTAG GTTTGAGTTT AGGCATATTA
TCAGCCGCTA AGCGCGGAAA AAAATTCGAT TATGCCGTTA TACTAATCGC AGTTATAGGA
ATATCCATTC CCAATTTTGT TCTGGGACAG ATGCTGCAAT ACTTTTTCGG CATCAAACAT
AATCTTCTTC CGATTACAGG CTGGGGCAGT TTTAAATATA CAGTCCTCCC TTCTTTAGCC
TTGGCCATAG GTCCGATTGC AAAATACTCC CGCTATATGC GTTCCAATTA TTTGGATATT
ATAAACCAAG ATTATATTTT AACTGCAAGA GCAAAAGGAG CTTCAAAGGT AAGAATTATA
AAAAGCCATA TTTTACGGAA CGCTTTTTTA CCGATCATAA CTATGCTCGG CCCTCAAATA
GCTTTTACCT TCACAGGCAC CTTTATAATC GAAAATATTT TTTCGGTTCC CGGACTGGGT
TCCTATTTTG TACGTTCAAT TTCAGAAAGA GATTATACAA TGGTAATGGG TCAAACTATT
TTTATTTCTT TTCTATATGT AGCATCTCTA ATTATAGTAG ACATAGCTTA TAACCTGCTC
GATCCGAGAA TTAAGGTGCA AGTAAAAAAT GAGGTTCTTT AA
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| Protein sequence | MLNFILKRIL YGILTMFIVA SITFFLVHII PGNPIETIAE NLPEERRNEL YSQYGYDKSL
FTQYMVFWKN LLMKGDLGTS LYYRGRLVTD VIKTHAPISA RLGLQALFFG VSVGLSLGIL
SAAKRGKKFD YAVILIAVIG ISIPNFVLGQ MLQYFFGIKH NLLPITGWGS FKYTVLPSLA
LAIGPIAKYS RYMRSNYLDI INQDYILTAR AKGASKVRII KSHILRNAFL PIITMLGPQI
AFTFTGTFII ENIFSVPGLG SYFVRSISER DYTMVMGQTI FISFLYVASL IIVDIAYNLL
DPRIKVQVKN EVL
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