Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0633 |
Symbol | |
ID | 2739358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 667918 |
End bp | 668718 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637159509 |
Product | D-alanyl-D-alanine carboxypeptidase, putative |
Protein accession | NP_971247 |
Protein GI | 42526149 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATTTTA CTCCAAAGAA GATTTTTTCT CTGTTTCTCT TTTTTGCATT TATGTTTTTT ATTTATCCAA ATGATAAAAT CTCTGATGAA GATATATATA AAAAAGTATA TACGTATATT TCAAAAAGAT TTCCTAAGCA AATTTTTAAT AAAATAAACA ATAATCGTGA GATTTTTTTT AAGGACTTAA ATGTTGTTTT GAAAAATGAA AAAGAAGATG AATTGATTTT GGTAGATAAG CTTAATTTTC TTGATAAGTC CTATGAACCT AAAAATATTA TATTGCTTTA TGATGTAAAA GATAGAAAGT ATCTTTTAGA GCGCTATGAT ATCTATCTTG CAAAAATTGC GGAGCGTCCC TTGCAAAAAT TAGCAGAAGC TGCAAAAAAA GAAGGGATAG AAATAATGAT AAGTTCGGGC TATCGTTCTT ATATCTATCA GGCAAATCTT TTTTCAAAAT ATGTAAATGT GTATGGTAAA AAAGATGTTC AGTTTTTTTC TGCACCGCCC GGAGCAAGTC AGCATCAACT GGGTACCGTA ATCGATTTAG GCAGTATTGA TGATTCTTAT GCCGATACTG CTGAAGGAAA ATGGATGTTT AAAAATGCGT GGAAATACGG CTGGTCCCTA TCCTATCCTA AAGATATGGA GCATATTACA GGCTATAAAT GGGAGAGCTG GCACTATCGG TATTTGGGAG TTGAAGCTTG TAAATTTCAA AAAGAATGGT TCGGCGATAT TCAGCAATAT ATGCTGGAAT TTATTGATCT TTGGAAAAAA GAGAAAGCAA AACTTAATTA G
|
Protein sequence | MYFTPKKIFS LFLFFAFMFF IYPNDKISDE DIYKKVYTYI SKRFPKQIFN KINNNREIFF KDLNVVLKNE KEDELILVDK LNFLDKSYEP KNIILLYDVK DRKYLLERYD IYLAKIAERP LQKLAEAAKK EGIEIMISSG YRSYIYQANL FSKYVNVYGK KDVQFFSAPP GASQHQLGTV IDLGSIDDSY ADTAEGKWMF KNAWKYGWSL SYPKDMEHIT GYKWESWHYR YLGVEACKFQ KEWFGDIQQY MLEFIDLWKK EKAKLN
|
| |