Gene TDE0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0633 
Symbol 
ID2739358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp667918 
End bp668718 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content31% 
IMG OID637159509 
ProductD-alanyl-D-alanine carboxypeptidase, putative 
Protein accessionNP_971247 
Protein GI42526149 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTTTA CTCCAAAGAA GATTTTTTCT CTGTTTCTCT TTTTTGCATT TATGTTTTTT 
ATTTATCCAA ATGATAAAAT CTCTGATGAA GATATATATA AAAAAGTATA TACGTATATT
TCAAAAAGAT TTCCTAAGCA AATTTTTAAT AAAATAAACA ATAATCGTGA GATTTTTTTT
AAGGACTTAA ATGTTGTTTT GAAAAATGAA AAAGAAGATG AATTGATTTT GGTAGATAAG
CTTAATTTTC TTGATAAGTC CTATGAACCT AAAAATATTA TATTGCTTTA TGATGTAAAA
GATAGAAAGT ATCTTTTAGA GCGCTATGAT ATCTATCTTG CAAAAATTGC GGAGCGTCCC
TTGCAAAAAT TAGCAGAAGC TGCAAAAAAA GAAGGGATAG AAATAATGAT AAGTTCGGGC
TATCGTTCTT ATATCTATCA GGCAAATCTT TTTTCAAAAT ATGTAAATGT GTATGGTAAA
AAAGATGTTC AGTTTTTTTC TGCACCGCCC GGAGCAAGTC AGCATCAACT GGGTACCGTA
ATCGATTTAG GCAGTATTGA TGATTCTTAT GCCGATACTG CTGAAGGAAA ATGGATGTTT
AAAAATGCGT GGAAATACGG CTGGTCCCTA TCCTATCCTA AAGATATGGA GCATATTACA
GGCTATAAAT GGGAGAGCTG GCACTATCGG TATTTGGGAG TTGAAGCTTG TAAATTTCAA
AAAGAATGGT TCGGCGATAT TCAGCAATAT ATGCTGGAAT TTATTGATCT TTGGAAAAAA
GAGAAAGCAA AACTTAATTA G
 
Protein sequence
MYFTPKKIFS LFLFFAFMFF IYPNDKISDE DIYKKVYTYI SKRFPKQIFN KINNNREIFF 
KDLNVVLKNE KEDELILVDK LNFLDKSYEP KNIILLYDVK DRKYLLERYD IYLAKIAERP
LQKLAEAAKK EGIEIMISSG YRSYIYQANL FSKYVNVYGK KDVQFFSAPP GASQHQLGTV
IDLGSIDDSY ADTAEGKWMF KNAWKYGWSL SYPKDMEHIT GYKWESWHYR YLGVEACKFQ
KEWFGDIQQY MLEFIDLWKK EKAKLN