| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0580 |
|---|
| Symbol | |
|---|
| ID | 2741016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 615478 |
|---|
| End bp | 616776 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637159456 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_971194 |
|---|
| Protein GI | 42526096 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTT TTAAGTTTAC GGTTTCCGGA ACTATTTATA TTATATTTTC AATTCTCTTG
TTGACGGGAG CCGCTATTCG AGGCGAATTG TTTGCAATTG TTTGCGGCGT TTGCTTATGC
CTTTATGTTG TGCTTTCCTT AATTTTTATT AGTCTTTCCG TCTTGTTATG GAAGAAAACG
GATTTATTGG TAGAATTAAA AAATGAAAAT ATTTCCATTC TACCCTCAAG AGTCCGAAAA
GGGAAAAAAC TTTTTTCGAT TATTTTACCG GGGGTTATTG TATTTTACGG TTTTGAGTTT
TTATCGGATT TAAAAAATAA AAAAAGCAGA AGTTTAAAAT TTAATATTAA ACTTAAAAGG
TTTGCGGCCC ATTTTCCTCT GCCAAAAGAA GAAAGAGGTA GATTTTTTTT GGAAAAAGAG
TATATCGAAA TTTCCGATCT TGCAGGATTT TTTTCATTTC GATTGTTAAA AAAAGAAAAA
TCCATACCTC AACTTTTTAT TTATCCGATG TTGACAGAAA TAAAAAGCTT TGCGATTCCC
GAAATTTTAA ATGAAACATC AGCTCATACT ATAAACTTGA GACGGACTGA TGAACTTTAT
GATTCCCGCC CTTATTTTCC TGGTGATGAT ATAAGAAAAC TTAATTGGAA GCTGTATGCT
CACACTCAGG AACTTAGTAT AAAACAGGGA GATTTTGTTC CTCCGCCAAG AAGTTTTTTT
ACAATATATG TTGAAAGTCC GATTGTAAAT AACGATATTG AATTTTATAA AAAGAAATTC
GATGAGTTTA TTAATTTGAG TACGTCGATA GCTTTTTATT TACATCAAAA AGGAATAAGT
TTTAATATTC GTTTTTATGA TAACGAAAAA AACTCTTATG AAACGGGGAG CGTTTACTCG
GATGATAGAG ATGTGGAAGA ATCGATAAAA AGATTTTTTT CCATTCCGCA AATTAGGGTT
CAAAAAAAAT CAAGCGAGGC TGAACCTAAA TTAAAGAGGA ATTTTTTTAT TGATGGGGAA
AACAAAAAAA CTTGTTTGCT CTATTTTTTT ATGCCCGTAC AATCAAGCAA GAAAATTTTA
GATAAACTTT TTGGAATCTT TTCAGATCAT AAAAAAGAAT GTGTTTTTTA TACCGGACCG
GAAAGTATAA TTATTGAACC TAAAAATATT TTACATTCTT TTTTGTTTTA TACTTCGTCT
CAAAAAAAAT ATAACCGCTT GTCAAAAGAA ATGAACGAAA AAATTGAGAT TCTAAAACAC
GAATTGAAGA CCGGAGGATT TTATGCTTAC TCGATATAA
|
|---|
| Protein sequence | MKVFKFTVSG TIYIIFSILL LTGAAIRGEL FAIVCGVCLC LYVVLSLIFI SLSVLLWKKT
DLLVELKNEN ISILPSRVRK GKKLFSIILP GVIVFYGFEF LSDLKNKKSR SLKFNIKLKR
FAAHFPLPKE ERGRFFLEKE YIEISDLAGF FSFRLLKKEK SIPQLFIYPM LTEIKSFAIP
EILNETSAHT INLRRTDELY DSRPYFPGDD IRKLNWKLYA HTQELSIKQG DFVPPPRSFF
TIYVESPIVN NDIEFYKKKF DEFINLSTSI AFYLHQKGIS FNIRFYDNEK NSYETGSVYS
DDRDVEESIK RFFSIPQIRV QKKSSEAEPK LKRNFFIDGE NKKTCLLYFF MPVQSSKKIL
DKLFGIFSDH KKECVFYTGP ESIIIEPKNI LHSFLFYTSS QKKYNRLSKE MNEKIEILKH
ELKTGGFYAY SI
|
|---|
| |