Gene TDE0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0479 
Symbol 
ID2740526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp535119 
End bp536741 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content39% 
IMG OID637159351 
Producthydroxylamine reductase 
Protein accessionNP_971093 
Protein GI161579584 
COG category[C] Energy production and conversion 
COG ID[COG1151] 6Fe-6S prismane cluster-containing protein 
TIGRFAM ID[TIGR01703] hydroxylamine reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTGTT TTCAATGTCA GGAGACATTT AAAAATTCAG GCTGCGTAAG GGTCGGAGTA 
TGCGGGAAAA ACCCCTTAGT TGCAGGATTA CAGGACTTTC TCATCTGGGG AACAAAAAAG
CTTTCCGAGG TGACAAGTTA TATGAGGGAA AACGGGATTA AGGTTGAAAA AGAAATTAAC
CACATCGTAA GCACAAACCT TTTTGTTACA ATAACCAATG CAAATTTTGA TGAAAAAGCA
ATTAACAACA GAATAAATAT TACTCTTAAA GCAATCCATG ATTTGCATAG TTCTTTAAAC
CGCCCCTTTG ATCCGGAGAT TGAAGTGTAT ATTGACTCGG ATATACCGAA AAGACTGGGC
AAGGCCATTA CAATAGGCGT TTTGCAGACA AAAGATCCCG ATAAGCGCTC CTTAAAAGAA
CTTATTATCT ATGGTCTAAA GGGGCTATGT GCCTATGTAA AACATGCTAA CGCCTTAGGC
TATGAAGACG AAGAGGTTGA TGCCTTTATT CAAAAAACGC TTTCAATGCT CATAGATGAA
AAATTGAGTG TTGATGAACT TATTTCTCTT ACCTTAAAGA CAGGAGAAGC AGGAGTTAAG
GGAATGGCTC TGCTGGATAG CGCCAACACA GGCAGCTACG GTAACCCCGA AATAACCGAA
GTTTCGATAG GTGTAAGAAA TAATCCGGGC ATCCTTGTAT CTGGGCATGA TCTAAAAGAT
ATCGAAATGC TTCTTGAGCA AACTGAGGGT ACAGGCGTTG ATGTTTATAC TCACTCCGAA
ATGCTCCCTG CAAATTATTA TCCGAAACTA AAAAAATATA AGCATCTTGC AGGTAATTAC
GGTAATTCGT GGGCCAAACA GGTTTCCGAA TTTGAAAGTT TTAACGGCCC AATCCTTATG
ACAACCAACT GTATAATTCC TTCAAAGGCT TCCTACGTAT CAAGAATGTA CACGACAAAT
GCAGCAGGAC ATCCCGGCTG TGTTCATATC GAAGCCGATG AAAACGGACA TAAGGACTTT
TCCGAAATTA TAAAAAAGGC AAAATCCTGT CCGCCCCCAA AAGAAATTGA AAGCGGAAAG
ATTATAGGCG GCTTCGCTCA CGCCCAAGTT TTTGCTCTTG CCGACAAAAT TGTCGAAAGC
GTAAAAAACG GAGATATTAG AAAATTCATA GTAATGGGCG GCTGTGACGG CAGGCACACA
ACAAGATCTT ATTATACGGG TTTTGCAGAA GCTCTTCCAA AAAATACCGT CATTCTAACG
GCAGGCTGTG CAAAATACAG GTATAATAAA TTAAATCTTG GAGATATAAA CGGCATTCCA
AGGGTATTGG ATGCAGGACA GTGCAATGAT TCTTATTCCC TTGCCCTTAT AGCTCTTAAA
TTGAAGGAAA TATTTAACCT AAGCGATATT AATGATTTAC CTATAATTTT TAATATAGCA
TGGTACGAAC AAAAAGCCGT TATAGTACTC TTGGCCCTAT TGTTCTTAGG CGTAAAAAAC
ATACACCTTG GGCCTACTAT TCCCGGCTTC CTTTCACCCA ACGTAAAGGA TGTTTTAATA
AGCAAATTCG GATTATCGGG AATCTCTTCA ATAGAAGATG ATATAAAACA TTTTTTCGGT
TAG
 
Protein sequence
MFCFQCQETF KNSGCVRVGV CGKNPLVAGL QDFLIWGTKK LSEVTSYMRE NGIKVEKEIN 
HIVSTNLFVT ITNANFDEKA INNRINITLK AIHDLHSSLN RPFDPEIEVY IDSDIPKRLG
KAITIGVLQT KDPDKRSLKE LIIYGLKGLC AYVKHANALG YEDEEVDAFI QKTLSMLIDE
KLSVDELISL TLKTGEAGVK GMALLDSANT GSYGNPEITE VSIGVRNNPG ILVSGHDLKD
IEMLLEQTEG TGVDVYTHSE MLPANYYPKL KKYKHLAGNY GNSWAKQVSE FESFNGPILM
TTNCIIPSKA SYVSRMYTTN AAGHPGCVHI EADENGHKDF SEIIKKAKSC PPPKEIESGK
IIGGFAHAQV FALADKIVES VKNGDIRKFI VMGGCDGRHT TRSYYTGFAE ALPKNTVILT
AGCAKYRYNK LNLGDINGIP RVLDAGQCND SYSLALIALK LKEIFNLSDI NDLPIIFNIA
WYEQKAVIVL LALLFLGVKN IHLGPTIPGF LSPNVKDVLI SKFGLSGISS IEDDIKHFFG