| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0370 |
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| Symbol | murD |
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| ID | 2740122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 421224 |
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| End bp | 422654 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637159242 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | NP_970984 |
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| Protein GI | 42525886 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATAA GCTTAGAAAA TATAAAGAAT AAAAAAGTAA CCGTTATGGG ACTTGGTCTA
AATGGGGGAG GGCTTGCGAC TGCTCAATTT TTTGCCAGAT ATGGAGCCGA GGTTACGGTA
ACCGATTTAA AAACTTCGGA AGAGCTAAGG CCGTCAATCG AAAAACTTTC TTCCTTTAAG
AATATTCGAT TTGTATTGGG TGAACATAGA ATAGAGGATT TTAGGGAAGC CGATCTTGTC
ATCAAAAATC CCGGAGTAAA ACTTGAAGGA AATGTTTTTT TAGAAGCCGC AAAGCAAATA
GAGTCCGACG TTTCGGTTTT TCTTTCTCTT TCAAAAGCGC CGATTTTGGC GGTAACGGGA
AGCAAGGGAA AATCCTCTAC GGTAAGTGCT CTTTATTACG GACTTAAAAA GTTAGGATAC
AATGCTTTTT TGGGCGGGAA TATTACGGTC AGCCCTTTAA GTTTTTTTGA AGAAACCTCT
TGCGATACGC CTGTGGTTCT GGAGCTTTCC AGTTGGCAGC TTGCCGATTT AAAAAATAAA
AAACTGCTTA AGCCTAAGAT TGCGATTATT ACGCCCATAA TGCCCGACCA CTTAAACTGG
TACGGCACAA TGGAAAAATA TGTTGCCGAT AAAAAAATAA TCTATGAAAA TATGGATGAA
GCGGATTATC TAATCTGTAA TTTTGATGAC GGCTGGGGGA AAATTTTTGC AGAAGAAACA
AGGGCAAATG TTTTTTGGTA CAGTGAAAAA AAGCCGGCTA AAAAATATCG AGGTGTTTTT
TTTAATAAGA ACCAAGAAGG CCTTTGCAAT TTAAGTGATG GAGAAAGGCT TTTACTTTCA
AAGGATGCAA AAGTTCCCGG GCTTAAACTT AAACAAAATG TCTTGAACGC AGGTCTTGCT
CTTCTGCTTT ATCAAAAAAT TCATAAGCCT GAAAATTTAA AAGACAATAA CATCAAAGAG
CAATCCGAAT TTATCCGTAA ATTTATGGAC GAGTATTCGG GGATTGAACA TCGATTGGAA
TTCTTTTATG AAAAAAACGG AATAAAATTT TATAATGATA CGGCCGCTAC AATTCCCGAA
GCATCTGCTG CTGCCTTAGA AGCCTTTGAT AAGCCGCCCG TCTTAATTTG CGGCGGAACA
AATAAAAACT TAAATTTTAT TCCGCTTGCC GAAAAAGCAA ATCTTGCCAA AAGCCTATAT
CTTCTTGCAG GAACGGGAAC AGACCTTTTA ATTCCTCTTC TTAAAGAAAA GTCTATTGAA
TATAATGGCC CCTTTGACAG TTTGGATTCT CTTTTGCTTT TGTTAAAAGA AAATGCAGAA
AAAGGAGATG TCGTAATTCT ATCACCGGGT GCAGCCTCCT TCGGCATGTT TAAAAACGAA
TTCGACCGCG GAAATAAATT TAAAGAAAAG GTAAAAGAAA TATTTTGCTG A
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| Protein sequence | MQISLENIKN KKVTVMGLGL NGGGLATAQF FARYGAEVTV TDLKTSEELR PSIEKLSSFK
NIRFVLGEHR IEDFREADLV IKNPGVKLEG NVFLEAAKQI ESDVSVFLSL SKAPILAVTG
SKGKSSTVSA LYYGLKKLGY NAFLGGNITV SPLSFFEETS CDTPVVLELS SWQLADLKNK
KLLKPKIAII TPIMPDHLNW YGTMEKYVAD KKIIYENMDE ADYLICNFDD GWGKIFAEET
RANVFWYSEK KPAKKYRGVF FNKNQEGLCN LSDGERLLLS KDAKVPGLKL KQNVLNAGLA
LLLYQKIHKP ENLKDNNIKE QSEFIRKFMD EYSGIEHRLE FFYEKNGIKF YNDTAATIPE
ASAAALEAFD KPPVLICGGT NKNLNFIPLA EKANLAKSLY LLAGTGTDLL IPLLKEKSIE
YNGPFDSLDS LLLLLKENAE KGDVVILSPG AASFGMFKNE FDRGNKFKEK VKEIFC
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